Frigoribacterium sp. NBH87: F1C15_07505
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Entry
F1C15_07505 CDS
T06748
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
frn
Frigoribacterium sp. NBH87
Brite
KEGG Orthology (KO) [BR:
frn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
frn03032
]
F1C15_07505
03400 DNA repair and recombination proteins [BR:
frn03400
]
F1C15_07505
Enzymes [BR:
frn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
F1C15_07505
DNA replication proteins [BR:
frn03032
]
Prokaryotic type
DNA Topoisomerases
F1C15_07505
DNA repair and recombination proteins [BR:
frn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F1C15_07505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QNE43673
UniProt:
A0A7G6YYV8
LinkDB
All DBs
Position
complement(1622242..1623216)
Genome browser
AA seq
324 aa
AA seq
DB search
MPRLRRTDQAHPGISRHRSGTGFSYRDADGSTISDPVVRERLDHLGIPPAWTDVWIAPYP
NGHVQATGKDAAGRRQYIYHPTWREQKDRIKFDRALSLAESLPTARRFVTMDLRLDEPVR
DRALGAAFRMLDTGSLRVGSERYAEEHGSHGLSTLLCSHGKVSGDVVALSFPGKSGQEWD
SEIRDPDLAAVVRSLKTRGGRSRLLAWRPEAGSPWRPLHASEINEYVKLRAGDDFTAKDF
RTLHGTVAAAVSLARSGPQPTVGRRRRALAQAMRDASDVLGNTPSIARKSYVDPRLVDAY
EHGETIDPGRLGSAESEVRSLLYR
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcctccgacgcaccgatcaggcccatcccggcatctcgcgtcaccgctcgggc
acgggcttcagctaccgtgacgccgacgggtcgaccatcagcgacccggtcgtgcgggaa
cggctcgaccacctcgggatcccgcccgcgtggacggacgtctggatcgcgccgtacccc
aacgggcatgtgcaggccacgggcaaggacgccgccggccggcgccagtacatctaccac
ccgacctggcgtgagcagaaggaccggatcaagttcgaccgcgccctctccctcgcggag
tcgctgcccaccgcccgcaggttcgtcacgatggacctgcgcctcgacgagcccgtccgc
gaccgcgccctcggggcggcgttccgaatgctcgacaccggctcgctgcgggtcggctcg
gagcgctacgcggaggagcacggcagccacgggctctcgaccctgctctgctcgcacggg
aaggtgtccggtgacgtggtcgcgctctccttccccggcaagagcggccaggagtgggac
agcgagatccgtgaccccgacctcgctgcggtcgtgcgcagcctcaagacccggggtggc
cgctcacgcctcctggcctggcgaccggaggccgggagcccctggcggcccctgcacgcg
tcggagatcaacgagtacgtgaagctgcgggccggcgacgacttcaccgccaaggacttc
cgcaccctgcacggcacggtcgcggccgccgtgagcctcgcccggagcggaccgcagccc
acggtcggtcggcgccgccgggcgctcgcgcaggcgatgcgcgacgcgtcggacgtcctg
gggaacaccccgagcatcgcgcggaagtcgtacgtcgacccgcgtctcgtcgacgcgtac
gagcacggcgagacgatcgacccgggccgcctgggctcggcggagtccgaggtgcgctcg
ttgctctatcgctga
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integrated database retrieval system
