Frigoribacterium sp. NBH87: F1C15_08225
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Entry
F1C15_08225 CDS
T06748
Name
(GenBank) tandem-95 repeat protein
KO
K20276
large repetitive protein
Organism
frn
Frigoribacterium sp. NBH87
Pathway
frn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
frn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
F1C15_08225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Cadherin_4
CshA_repeat
HYR_4C
SpaA_3
K319L-like_PKD
HYR
SpaA_4
Motif
Other DBs
NCBI-ProteinID:
QNE43789
UniProt:
A0A7G6YZ74
LinkDB
All DBs
Position
complement(1776053..1781416)
Genome browser
AA seq
1787 aa
AA seq
DB search
MPSSLSARSLGRRTVAVGLTALLAAGVLTTVTPAAPALAASPLACDQNTVYSITSTGQVR
SVDLATGTVASVATLTGATNGLGIGAGGLRAYATGVSNGVPQIITYDREGETSTPTTRPE
AANLNIIRGGVNPQSGSYYYAAAQAQPQLSAYVPPKPPEPGVALGRVGTIGITGNTTVGN
GDLAFSRSGTMFVVSNALVQRADVPVPTTSGDTPIPTTNIATLGGTNAAYNGIAFSHDGT
LFLSRSTGTAQAPQTTLTEVDPASGATIKETVLPGFATVDLATCNYPNTTSASTTIVDRA
KPSDQFGVTLTGGGIPAGSPSATATTAPGSDTATAGPILAVGGTQYTVEQKPGNSTTLPA
DYATSYTCADGSTVVSEGTGTKATYTQPTSKSEASSEVTCSFVNVLAAAAKDDAEEAVSG
VATTFTDLRANDAGTGLKITGVTQGSARGVVELRADGTVGYTADRGFSGTETFTYTVTDA
SGASSTATVTVTVAPHAVDDDATVPAQPSGSSTTIPATTLLGNDAGSGLTIVDATVVSGG
GSVTVAPGGDLVYSPEPGTSGPASITYTVADAAGVRSTATVSLTVAPTPGDDARSAPAGQ
TTTFTDLLSNDLGTGLTVVGAKVVSGGGEVSVDRDGGVVLDPATASSGGTIVVTYTVRDA
SGTERTATLTVTVDPAAAADAKTVVAGTPTTFTDLAGNDVGTDVTVTGVSQGSAGGKVEL
GRDGSVTYTSRDDFSGTETFTYTAKDASGRTSTATVTVTVTPQARDDRATATPGESTTLR
DLRANDLGRGLTVTAVTAGSAGGAVRLEQDGTVTYTPAARFSGAETFGYTVTDAAGRTSS
ATVTMTVAPTAVDDARSVPTGAATTLADLLANDRGSDLTVTAVTASTGGRVDVALDASGA
VVVTPAVGFSGTEQFDYTVTDVDGQESTATVTLTVTPRAAPDAYEVPAETATTLVDVTAN
DRGQRLVVTSVTAGDQGGTTSVDQRGRVTHTGAPGFSGTETFGYTATDASGQVVSSVVTM
TIRPTAADDARSTPADTALSLTDLVADDHGKALVVTAVGSTTAGGAASVDRAGQVTYVPA
AGFSGTDSFGYTATDAAGRTADAVVTVTVVPTAVADVRSTPADTALTIADLLANDHGKAL
RIQSVTAGDQGGTTRLGTDGRVVYTPAVGFSGVETFGYTVVDAAGQTSSTTVSVTVTPTA
SPDARRTVSGQQTVFSLMADVRGRGLRLLSVSAPAHGTAMSTTDGWVTYVPDAGFSGVDT
FSYRVADDSGQERESTVTVTVSPVATVDSASTPAGTPLVLRAAQLTGNDRGSRLAVTRVG
TPSSGTATLLPDGSVRFVPAPGTSGAATFDYTVTDADGLTADSVVTVLVGPTATPDAATV
AAGGRLEVAAAQGVLANDAGTGLTARVDVEPGHGTVALAADGSYTYEPADGFSGTDTFTY
TATDDRGSVTTGLVTVTVTPTAAPDRAHVAAGTTLTVAAPAVLGNDLGRDRVVVGHAAAA
HGTLSIGSDGAVVYTPAPGWSGSDEVTYDVVDAEGLPASSTLTIVTDPVAVDDAASTVAG
RALRVPADAGLLANDLGTGLVASIATQPAHGTATVAADGSWTYKPAEGFTGTDSFTYLVT
SVDGATSTATVTIAVRSAAVAADDTQLATPGRPVTIDPLANDLASGGQTLDRGTLVLVDP
ATGVAASTVTVPGQGTWTVGADGVRFTPVDGFTGVASIAYRVADTSAETLEGLITLRFPA
ILGLAFTGAGHVAADLGVALLVMLAGLGLVLFGRRRRPVTGPVRGLR
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atgccctcctccctgtctgcccgctcgctcgggcgccgcaccgtcgccgtcgggctcacc
gccctgctcgcggcgggcgtcctcaccaccgtcacgccggcggccccggcgctcgccgcc
agcccgctcgcctgcgaccagaacaccgtgtactcgatcacgagcaccggccaggtccgc
tcggtcgacctggccacgggcaccgtcgcctcggtcgcgacgctcaccggcgcgacgaac
ggcctcggcatcggcgcgggcgggctccgcgcctacgccacgggcgtctcgaacggcgtg
ccgcagatcatcacctacgaccgcgagggcgagacctcgacgccgaccacccggccggag
gcggcgaacctcaacatcatccgcggcggcgtgaacccgcagagcggcagctactactac
gcggccgcccaggcgcagccgcagctcagcgcctacgtgccgccgaagccccccgagccc
ggcgtcgccctcggccgcgtcggcaccatcggcatcacgggcaacaccaccgtgggcaac
ggcgacctcgccttcagccgcagcggcacgatgttcgtcgtctccaacgcgctcgtgcag
cgcgccgacgtgcccgtgccgacgacctcgggcgacacccccatcccgaccacgaacatc
gcgaccctcggcggcaccaacgcggcctacaacggcatcgcgttctcgcacgacggcacg
ctgttcctctcccgcagcaccggcacggcccaggccccgcagacgacgctgaccgaggtc
gacccggcctccggcgcgacgatcaaggagacggtgctgcccggcttcgcgaccgtcgac
ctcgcgacctgcaactaccccaacaccacctcggccagcacgaccatcgtcgaccgcgcc
aagccctccgaccagttcggcgtcacgctcaccggcggcggcatccccgccggcagcccc
agcgcgaccgcgacgacggcgcccggctccgacaccgccacggcgggcccgatcctcgcg
gtcggcggcacgcagtacacggtcgagcagaagcccggcaactcgacgacgctccccgcc
gactacgccacgagctacacctgcgccgacggcagcacggtcgtctcggagggcacgggc
accaaggccacgtacacccagccgacgtcgaagagcgaggcctcctccgaggtcacctgc
tccttcgtcaacgtgctcgcggccgcggcgaaggacgacgccgaggaggccgtctccgga
gtcgccaccaccttcaccgacctgcgcgcgaacgacgcgggcaccggcctgaagatcacc
ggcgtcacccagggcagcgcccgcggcgtcgtcgagctgcgcgccgacggcaccgtcggc
tacaccgccgaccgcggcttctcgggcaccgagaccttcacctacacggtcaccgacgcg
agcggcgcctcctccacggcgaccgtcaccgtcaccgtggccccgcacgccgtcgacgac
gacgccaccgtgcccgcgcagccgagcggcagctcaacgacgatcccggccaccaccctg
ctcggcaacgacgccggctcgggcctcacgatcgtcgacgccacggtcgtctccggcggc
ggcagcgtcaccgtcgccccgggcggcgacctcgtctactcgcccgagcccggcacctcc
ggccccgcgagcatcacctacacggtcgccgacgccgccggcgtgcgctcgaccgccacg
gtctcgctgacggtcgccccgacccccggcgacgacgcccgcagtgccccggccggccag
accaccaccttcaccgacctgctcagcaacgacctcggcacgggcctcacggtcgtcggc
gcgaaggtcgtctccggcggcggggaggtctccgtcgaccgcgacgggggcgtcgtgctc
gacccggccaccgcctcctcggggggcacgatcgtggtgacgtacaccgtccgcgacgcc
tcgggcaccgagcgcaccgcgacgctgaccgtcacggtcgacccggccgccgccgccgac
gcgaagaccgtcgtcgcgggcacgccgaccaccttcaccgacctcgccggcaacgacgtg
ggcaccgacgtgaccgtcaccggcgtgagccagggctcggccggcgggaaggtcgagctg
ggccgcgacggctcggtcacctacacgagccgcgacgacttctcgggcaccgagaccttc
acctacacggcgaaggacgcctcgggccgcacctcgaccgcgaccgtcacggtcaccgtc
acgccccaggcccgcgacgaccgcgcgacggcgacgccgggcgagtcgacgacgctgcgc
gacctccgggcgaacgacctcggtcgcggcctcaccgtcaccgccgtcacggcgggcagt
gcaggaggcgcggtgcgcctcgagcaggacggcaccgtcacgtacacccccgccgcccgc
ttcagcggggccgagaccttcggctacacggtcaccgacgccgcggggcgcacgagctcc
gcgaccgtgacgatgaccgtcgcgccgaccgccgtcgacgacgcccgcagcgtcccgacc
ggggccgccacgacgctcgccgacctgctcgcgaacgaccgcggcagcgacctgaccgtc
accgccgtcaccgccagcacgggcggccgggtcgacgtggccctcgacgcctcgggcgcc
gtcgtcgtgacccccgccgtcggcttctcgggcaccgagcagttcgactacaccgtcacc
gacgtcgacgggcaggagagcaccgcgaccgtcaccctgacggtcacgccccgcgccgcg
cccgacgcctacgaggtgccggccgagaccgcgacgaccctcgtcgacgtcacggccaac
gaccgcggccagcgcctcgtcgtgacctccgtcaccgcgggcgaccagggcggcacgacc
tccgtcgaccagcgcggccgcgtcacccacaccggtgcgcccggcttctcggggaccgag
accttcgggtacacggcgaccgacgcctccggccaggtcgtctcgtcggtcgtcaccatg
acgatccgcccgaccgccgccgacgacgcccgcagcacgccggccgacacggcgctgtcg
ctcaccgacctcgtcgccgacgaccacgggaaggccctcgtcgtcaccgccgtcgggtcg
accaccgcgggaggcgcggcgtcggtcgaccgggccggccaggtcacgtacgtgcccgcc
gccggcttctcgggcaccgactccttcgggtacaccgcgaccgacgcggccggccgcacg
gccgacgccgtcgtcaccgtcaccgtcgtgccgaccgccgtcgccgacgtgcggagcacc
cccgccgacacggccctgaccatcgccgacctcctggcgaacgaccacgggaaggccctg
cgcatccagtccgtcaccgccggcgaccagggcggaaccacgcgcctcggcaccgacggc
cgggtcgtctacacgccggccgtcggcttctcgggcgtcgagaccttcggctacacggtc
gtcgacgcggccgggcagaccagcagcacgaccgtctcggtcaccgtcacgccgaccgcg
tcgcccgacgcgcgccgcaccgtctcgggccagcagaccgtgttcagcctgatggccgac
gtccgcggccgtggcctgcgactgctctcggtctcggccccggcgcacggcaccgccatg
tcgacgaccgacggctgggtcacctacgtgcccgacgccgggttctcgggcgtcgacacg
ttcagctaccgcgtggccgacgactcgggccaggagcgtgagtcgaccgtcaccgtcacc
gtctcgcccgtcgcgacggtcgactccgccagcacccccgccggcaccccgctcgtgctg
cgcgccgcccagctgaccggcaacgaccggggctcgcgcctcgccgtgacccgggtcggc
acgccctcgtcgggcacggcgacgctgctgcccgacggctcggtgcgcttcgtgccggcc
cccggcacctcgggcgccgcgaccttcgactacacggtgaccgacgccgacggcctgacc
gccgactccgtcgtgaccgtgctcgtcggccccaccgcgacgcccgacgctgcgacggtc
gccgccggcggacgcctcgaggtcgccgccgcccagggcgtgctcgcgaacgacgccggc
accggcctcaccgcccgcgtcgacgtcgagccgggccacggcacggtggccctcgccgcc
gacgggtcgtacacgtacgagcccgccgacgggttctcgggcaccgacaccttcacctac
acggccaccgacgaccgcggcagcgtcaccaccgggctcgtgaccgtcaccgtcacgccg
accgcggcccccgaccgggcgcacgtcgccgcgggcacgacgctcacggtcgccgcgccc
gcggtgctcggcaacgacctcggccgcgaccgggtcgtcgtcggccacgccgccgcggcc
cacggcaccctgtcgatcggctcggacggcgccgtcgtctacacgccggccccgggctgg
tcgggcagcgacgaggtgacctacgacgtcgtcgacgccgaggggctgccggcgagcagc
acgctcacgatcgtgaccgacccggtcgccgtcgacgacgcggcgagcacggtcgcgggc
cgggccctgcgcgtcccggccgacgcgggcctgctggcgaacgacctcggcaccggcctg
gtcgcgtcgatcgcgacgcagccggcgcacggcaccgccacggtcgcggccgacggctcg
tggacctacaagcccgccgagggcttcaccggcaccgactcgttcacctacctcgtgacc
tcggtcgacggagccacgagcacggcgacggtcaccatcgccgtgcgcagcgccgcggtc
gccgccgacgacacgcagctcgcgacgccgggccgcccggtcacgatcgacccgctcgcc
aacgacctcgcgagcggcggccagaccctcgaccgcggcacgctcgtgctcgtcgacccg
gccaccggcgtcgcggccagcacggtcaccgtgcccggccagggcacctggacggtcggc
gccgacggcgtccgcttcacccccgtcgacggcttcaccggcgtcgcgtcgatcgcgtac
cgggtcgccgacacctcggccgagaccctcgagggcctgatcacgctgcgcttcccggcg
atcctcggcctggcgttcaccggggcgggccacgtggccgccgacctcggcgtcgcgctg
ctcgtgatgctcgccgggctcgggctggtgctgttcggccgtcgtcgccggccggtgacg
gggccggtgcgcgggctccggtag
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