Frigoribacterium sp. NBH87: F1C15_09145
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Entry
F1C15_09145 CDS
T06748
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
frn
Frigoribacterium sp. NBH87
Pathway
frn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
frn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F1C15_09145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
frn03019
]
F1C15_09145
Enzymes [BR:
frn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
F1C15_09145
Messenger RNA biogenesis [BR:
frn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
F1C15_09145
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
HalX
Motif
Other DBs
NCBI-ProteinID:
QNE43945
UniProt:
A0A7G6YZN0
LinkDB
All DBs
Position
1960203..1961633
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AA seq
476 aa
AA seq
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MDTVASALQRLDLLAAAPRVSALASAFAAAGHELALVGGPVRDAFLGRPVNDLDFTTSAS
PDEILAIVVPLAEAHWDVGRAFGTIAARVDGEVVEITTYRSDVYDGETRKPVVEFGDTLE
GDLVRRDFTVNSMALRLPQKVLVDPAGGVEDLLARRLATPGTAVDSFRDDPLRMMRAARF
TAQLGFAVSEEVREAMTTRASTLSIVSVERVADELSKLLRTDTPRDGVRLLVDTGLADHV
VPELAAMRLEVDEHHHHKDVYEHSLTVLDQAIGYERERHPGEAPDLTLRLAALLHDCGKP
ATRRLEAGGVVTFHHHDVVGSKLAKKRLKALRFDNDTIAAVSRLIELHLRFFGYTEGAWT
DSAVRRYVRDAGDQLERLHMLTRADVTTRNRRKADRLGFAYDDLEARIAELRDREELDSL
RPDLDGDEIQRVLGISPSREVGEAYRFLLELRTEEGPLGAEVATERLLAWWAARQG
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgtcgcctccgccctccagcgactggacctcctggccgccgccccccgcgtc
tccgcgctcgcctccgccttcgccgcggccggccacgagctggcgctcgtcggcggcccg
gtccgcgacgcgttcctcggccggccggtcaacgacctcgacttcacgaccagcgcctcc
cccgacgagatcctcgcgatcgtcgtgccgctcgccgaggcccactgggacgtcggccgg
gccttcggcaccatcgccgcccgcgtcgacggcgaggtcgtcgagatcaccacctaccgc
agcgacgtctacgacggcgagacccgcaagcccgtcgtcgagttcggcgacaccctcgag
ggcgacctcgtgcggcgcgacttcaccgtcaactcgatggcgctgcggctgccccagaag
gtgctcgtcgaccccgcgggcggcgtcgaggacctgctggcccgccgcctcgcgacgccg
ggcacggccgtcgactcgttccgcgacgacccgctgcgcatgatgcgggccgcacggttc
accgcgcagctcggcttcgcggtctcggaggaggtgcgggaggcgatgacgacccgcgcc
tccaccctctccatcgtgtcggtcgagcgcgtcgccgacgagctctcgaagctgctgcgc
accgacaccccccgagacggtgtccgcctcctggtcgacacgggtctcgccgaccacgtc
gtgcccgagctggccgcgatgcggctcgaggtcgacgagcaccaccaccacaaggacgtc
tacgagcacagcctcaccgtgctcgaccaggccatcggctacgagcgcgagcgccacccg
ggcgaggcccccgacctcacgctgcgcctcgccgcgctgctgcacgactgcggcaagccg
gccacgcgccgactcgaggccggcggcgtcgtcaccttccaccaccacgacgtggtcggc
tccaagctcgccaagaagaggctgaaggccctccgcttcgacaacgacacgatcgccgcc
gtctcgcgcctgatcgagctgcacctgcgcttcttcggctacaccgagggcgcctggacc
gactcggccgtccgtcgctacgtgcgcgacgccggcgaccagctcgagcggctgcacatg
ctcacccgcgccgacgtgacgacccgcaaccggcggaaggccgaccggctcggcttcgcc
tacgacgacctcgaggcccggatcgccgagctgcgcgaccgcgaggagctcgactcgctg
cggcccgacctcgacggcgacgagatccagcgcgtgctcggcatctcgccgagccgcgag
gtgggcgaggcctaccggttcctgctcgagctgcgcaccgaggaggggccgctgggcgcc
gaggtcgccaccgagcgcctgctcgcgtggtgggcggcgcggcagggctga
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