Frigoribacterium sp. NBH87: F1C15_14625
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Entry
F1C15_14625 CDS
T06748
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
frn
Frigoribacterium sp. NBH87
Pathway
frn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
frn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F1C15_14625 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
frn03400
]
F1C15_14625 (mutM)
Enzymes [BR:
frn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
F1C15_14625 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
F1C15_14625 (mutM)
DNA repair and recombination proteins [BR:
frn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
F1C15_14625 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DZR
DUF7573
Zn_ribbon_Nudix
Zn_ribbon_6
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
QNE44882
UniProt:
A0A7G6Z2B7
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All DBs
Position
3138164..3139150
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AA seq
328 aa
AA seq
DB search
MPELPEVEVVRAGLAPVVAGAVVTDVEVLDDRSLKRHRGPSDDFVDRLVGGTLDAAVRRG
KFLWFPFEPAAVHDQPLALVAHLGMSGQVLLRERDAEPDRLMRVRLDVESPAHGPLRLAF
VDQRIFGSMALDETVPTLDGAPAGWAGAELLGSGPLPSAADGRPADPTRASWELRVPQQV
SHIARDPLDPAFDEGRVLTRLLARRTGVKRALLDQGLLSGVGNIYADESLWAARVHPEQP
TESLTRARARTLLAEVRTVLLRALGEGGTSFDAQYVNVNGQSGYFSHSLAAYGQQGKPCP
RCGTPIERAAFMNRSSHFCPRCQRVHGA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtgccggagctccccgaggtcgaggtcgtccgcgccggcctcgcaccggtggtcgccggc
gccgtcgtcaccgacgtcgaggtgctcgacgaccggtcgctgaagcggcaccgcggcccc
tccgacgacttcgtcgaccgcctcgtgggcggcaccctcgacgcggcggtgcgccggggc
aagttcctctggttcccgttcgagcccgccgccgtgcacgaccagccgctggcgctggtg
gcgcacctcggcatgagcggccaggtgctgctgcgcgagcgcgacgccgagcccgaccgc
ctgatgcgggtgcggctcgacgtcgagagccccgcgcacgggccgctgcgcctcgccttc
gtcgaccagcgcatcttcggctccatggccctcgacgagaccgtccccacgctcgacggg
gcgcccgcgggctgggccggtgccgagctgctcggctccgggccgctgccgagcgcggcc
gacggccggcccgccgacccgacccgcgcctcctgggagctccgcgttccgcagcaggtc
tcgcacatcgcgcgcgacccgctcgacccggccttcgacgaggggcgggtgctgacgcgg
ctgctcgcccggcgcaccggcgtcaagcgggccctgctcgaccagggcctgctgagcggc
gtgggcaacatctacgccgacgagagcctctgggcggcgcgcgtgcaccccgagcagccc
accgagagcctgacccgggcccgtgcccggacgctgctcgccgaggtgcgaacggtgctg
ctccgcgccctgggcgagggaggcacgagcttcgacgcgcagtacgtcaacgtcaacggg
cagtcgggctacttcagccacagcctggcggcctacggccagcagggcaagccctgcccg
cgctgcggcaccccgatcgagcgtgcggcgttcatgaaccgctcgagccacttctgcccc
cggtgccagcgggtgcacggggcctga
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