Faecalibaculum rodentium: AALO17_00060
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Entry
AALO17_00060 CDS
T04268
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
fro
Faecalibaculum rodentium
Brite
KEGG Orthology (KO) [BR:
fro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fro03032
]
AALO17_00060
03400 DNA repair and recombination proteins [BR:
fro03400
]
AALO17_00060
Enzymes [BR:
fro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AALO17_00060
DNA replication proteins [BR:
fro03032
]
Prokaryotic type
DNA Topoisomerases
AALO17_00060
DNA repair and recombination proteins [BR:
fro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AALO17_00060
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AMK53140
UniProt:
A0A140DR63
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Position
6106..8679
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AA seq
857 aa
AA seq
DB search
MDELEKNNGYEVVDIASEMKDSFLDYSMSVIVQRALPDVRDGLKPVHRRILHAMNSLNMT
PGSAHKKSARIVGEVIGKYHPHGDTAVYDSMVRMAQDFSYRYPLVDGHGNFGSLDGDEAA
AMRYTEARMSRISMEMMRDINKDTVDFVDNYDGEEKEPVVLPSRIPNLLVNGSMGIAVGM
ATNIPPHNLKETAEAVCAYMDNPDITIPELMEFLPGPDFPTGGIILGRKGIRQAYETGRG
SLQVRSRYRVEELTGGRKRIVFYEIPFSVNKASLIAKMAALIRDKAIQGVTYLNDESNRE
GIRIVMDLKKDAQEDVILNQLFHLTPLQSGFGINMLALEGGRPRQLSLKEIIRDYVEHQV
EVIRRKTAFDLKKAQERAHILEGLRIALDHLDEIITTIRNSRSDEAGLNAELCEKFGFSY
EQSRAILAMQMKRLSGLERDKIESEYDALIQAIEDYKDILNREERVVQIIKDDLTEIVQK
YGDKRRTEISTDYVDMDDEDLIPREHVIITMTASGYIKRQPVSMYHAQNRGGKGIKSLTL
NDEDNVEHMVSMSTHSHLLLFTNQGRVYRLKGYNIPNASRTAKGTPIVNVMDLQPGESIR
TLLPVPENKEGFKSLIFVTRNGVVKRTAVGEFDSINRNGKIAIGLRPDDELKFVKGTTGD
DDVIIAGSKGKAIRFHESQIRMMGRTAAGVSGFNTDGGEVVGLALTHEGDTLLSVSENGF
GKRTSVEEFTRRSRGGKGMYAIHMTEKTGPLVSVMAVHGDEDAMIVASDGIMIRISLKDV
GLYSRQTQGLKLINLNDGATVTRLSLVHPEDEEIAEIHISEEESGQSEQDELKENVYTGD
LEVDESIETGSDDSSLE
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggacgaattggaaaagaacaacggatatgaggttgtggacattgccagtgaaatgaag
gattctttcctggattattctatgtccgttatcgtgcagcgtgcgctcccggatgtacgg
gacggcttgaagccggttcacagacgtattctgcatgcgatgaacagtttgaatatgacc
ccggggtctgcacacaagaaaagtgccagaattgttggagaagtcataggcaagtatcat
ccccatggtgatacggcagtgtatgattccatggtacgaatggcacaggatttctcttat
cgatatccacttgtggatggtcatggcaactttggatctctggatggagatgaagctgca
gccatgcggtatacagaagcccgtatgtccagaatttccatggaaatgatgcgtgatatc
aacaaggacacagtggattttgtggacaactatgatggtgaggaaaaggaacccgtggtt
cttccgtcaagaataccgaatctgcttgtgaatggttccatgggcatcgctgtgggaatg
gccacaaacattcctccgcataacctgaaagaaacagctgaggcagtttgtgcctatatg
gataatccggatatcacgatcccggaactgatggaatttttgccgggacctgattttccg
acagggggcatcattcttggcagaaagggtatccggcaggcctatgagacagggcgtggt
tctttacaggtccgttcccggtatcgtgtggaagagctcacaggtggaagaaaacggatt
gtcttttatgagatccccttttctgtgaacaaagccagcctgattgcgaagatggctgct
ctgatccgggacaaggcgatccagggcgtcacgtacctgaacgatgaatccaacagagaa
ggcatccggattgtcatggatctgaaaaaggatgcacaggaagacgtgatactgaaccag
ctgtttcatctgacacctttgcagtccggatttggaatcaacatgctggcactggaaggc
ggaaggccgaggcagctgagtctgaaggaaatcatccgcgattatgttgagcatcaggtg
gaagtgatcagaaggaaaactgcgttcgatctgaaaaaagcacaggagcgtgcacacata
ctggaaggtctgcgcattgcactggatcatctggatgagatcatcacaaccatcagaaac
agccggagcgatgaagcgggtttaaatgcagagctttgtgagaaatttggattttcatat
gaacagagcagagccatcctggctatgcagatgaagcggctgtccggtctggagcgggac
aaaattgaatctgaatatgatgccctgatccaggctattgaagattacaaagatattctg
aatcgggaagaacgtgttgtgcagatcatcaaagatgatttgaccgaaatcgtacagaag
tatggcgacaagcgacgtactgaaatatcgaccgactatgtggatatggatgatgaggac
ctgattcccagagaacatgtgatcatcaccatgacagcatccggttatatcaagcgccag
cctgtcagcatgtatcatgcccagaacagaggcggaaaaggcatcaagtcactgacattg
aatgatgaagacaacgtggaacatatggtttccatgtcgactcacagccatctgcttctg
tttaccaatcaaggccgcgtttatcgcctgaaaggctataatattcccaatgcttcccgc
acagccaaaggtaccccgattgtcaatgtcatggatctgcagccgggagaaagcattcgg
acactgttgccggttcctgaaaacaaagaaggattcaagagcctgatttttgtgaccaga
aacggtgtcgtgaagcggacagctgtcggtgaatttgattcgatcaaccggaatggcaag
atagcgattggtctcagaccggatgacgaattgaagttcgtaaagggaactacaggtgat
gacgatgtgatcattgccggctccaaggggaaggccatccggttccacgaatcgcaaatc
aggatgatgggacgcactgctgccggagtttcgggcttcaatacagatggtggtgaagtg
gttgggctggctcttacacatgaaggcgacacccttctttcagtcagtgaaaatggattt
ggcaaacggacatcagtggaagaatttaccaggcggagccgcggcggaaaaggaatgtat
gccattcatatgactgaaaaaacaggacctcttgtttctgtcatggcagttcatggagat
gaagatgcaatgattgttgcaagtgatggcatcatgatcagaatcagcctgaaagatgtg
ggcttgtacagtcgacagacccagggactcaaactgatcaatctgaatgatggtgctact
gtgacccgactgtcactggttcatcctgaagatgaagagattgcggaaatacatatttcc
gaggaagagagcggtcaatccgaacaggatgaattgaaagagaacgtgtataccggtgat
ctggaagtggatgaatcgattgaaaccggttcagatgattcttccctggagtga
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