Faecalibaculum rodentium: AALO17_00590
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Entry
AALO17_00590 CDS
T04268
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
fro
Faecalibaculum rodentium
Pathway
fro03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AALO17_00590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fro03400
]
AALO17_00590
DNA repair and recombination proteins [BR:
fro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AALO17_00590
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AALO17_00590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
nSTAND1
DnaJ_CXXCXGXG
AAA_29
RsgA_GTPase
AAA_25
AAA_33
AAA_22
nSTAND3
Viral_helicase1
AAA_21
GpP-like_1st
DUF4350
Motif
Other DBs
NCBI-ProteinID:
AMK53193
UniProt:
A0A140DRB6
LinkDB
All DBs
Position
69801..72620
Genome browser
AA seq
939 aa
AA seq
DB search
MENTIKIRGARENNLKNIDLDIPRDKLVIMTGVSGSGKTSLAFDTIYAEGQRRYMESLSA
YARQFLGNSEKPDVDQIDGLSPAIAIDQKTTSNNPRSTVGTVTEIYDYLRLLYARIGIPY
CPEHGEPIQGMTISEMVDQMMALPDRTRTTIMAPIVRGKKGTFKETFEKLIKDGFIRARV
DGEIVYLEEQGPLNKNQKHNIDVVVDRIIKSDNRSRFYDSIETAVNLADGMVDVLADDKE
FLLSANYACKICGFTVPKLEPKLFSFNAPLGACHHCKGLGITQSVDMDLLIPDRSLSIRQ
GGIRYLKNIVDTENLEWQKMYALIRHYDIDMDVPIRDIPKEKLDRILYGSLEPIGYTLYS
RSGSVTEKNDMIEGVIPLIERRFMETNSSWNREWYGSFISDQTCEECHGARLDEKVLAVR
VGGKNIYEWTQMSVDEAIEFMKNLQLTDTEKKVSELITKEIRSRLEFLHNVGLTYLTLNR
LAATLSGGEAQRIRLATQIGSRLTGVMYVLDEPSIGLHQRDNDKLIGTMKEMRDLGNTLI
VVEHDEDTMRASDYIVDVGPGAGIHGGEIIKAGTPEEVMACPDSVTGQYLSGKRSIPVPV
KRRKGNGNTLKIVKATQNNLKGVNATIRLGTLTVVTGVSGSGKSSLVTEVLTKGVEHALG
KLRVKPGACREIQGLENIDKLVVIGQEPIGRTPRSNPATYTGVFDDIRDLFAQTREAKLL
GYDKGRFSFNVKGGRCESCQGDGIKRISMHFLPDVYVPCDACHGKRYNEETLQVKYKDKT
IADVLDMTVEEAVVFFDGISRIRHKLQTLKDVGLSYIKLGQSATTLSGGEAQRVKLASEL
QKKPTGKTLFVLDEPTTGLHSADVEKLIEVLQRLVDNGDTVLVIEHNLDVIKNADQIIDI
GPEGGDAGGRIVAAGTPEQVAKVPESWTGQYLKPLLERK
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaccatcaagatccggggtgcaagagaaaacaacctgaaaaacatagacctg
gatatccccagggacaaactcgtcatcatgaccggtgtatctggttcaggcaaaaccagc
ctggcctttgacaccatttatgcagaaggccagcgccgctacatggaatcactgtccgcc
tatgcccgacagtttctcgggaattcggagaaaccggatgtggatcagatcgacggtctt
tccccggccattgccatcgatcagaaaacgacatccaataacccccgctccaccgtcgga
accgtcacggagatttacgactatctccggcttttgtatgcccgaataggcattccgtac
tgcccggaacatggagaaccgatccaggggatgacaatctccgaaatggtggatcagatg
atggcattgccggaccgcacgcgaaccaccatcatggctccgattgtccgcggcaagaag
gggaccttcaaggagacctttgagaagctcatcaaggatggattcatccgtgcccgtgtg
gatggtgaaattgtctacctggaagaacagggaccgttgaacaaaaaccagaaacacaac
atcgatgtggtcgtggaccggatcatcaaaagtgataacagatcccgtttctacgattcc
atcgaaacggcggtcaatctggcagacggcatggtggatgttcttgccgatgacaaagag
ttcctgctttcggccaattacgcctgcaaaatctgcggctttactgtcccaaaactggag
cccaagctgttttccttcaatgccccgctgggagcctgtcatcactgcaagggacttgga
atcacccagagtgtggacatggatctgctgattccggacaggagcctgagcattcgccag
ggcggcatccgctatctgaaaaatatcgtggataccgagaacctggaatggcagaaaatg
tatgccctgatccggcattacgacattgacatggatgtccccatccgcgacattcccaaa
gaaaaactcgatcgcatcctgtatggatcgctggaacccattggctatactctgtattcc
cgttcaggctccgtaacggaaaagaatgacatgatcgaaggcgtgattcccctgatcgaa
cgccggttcatggaaaccaattcctcctggaaccgggaatggtacggctcgttcatctca
gaccagacctgtgaagagtgtcatggagcgaggctggatgaaaaggttcttgcggtgcgt
gtcggcggcaagaacatctatgaatggacgcagatgtcagtggatgaagccattgaattc
atgaaaaatctgcagctgacggatacagagaaaaaagtatcggagctcatcacaaaggaa
atccgcagcagactggaatttctgcacaacgtcgggctcacgtacctgaccctgaatcgt
ctggcagccacattgtcaggcggagaagcacagcggatccgtctggccacacaaatcggt
tcccggctgacaggggtcatgtatgtgctggacgaaccctccatcggcctgcatcagcgg
gacaatgacaagctcattggcacgatgaaggaaatgcgggacctgggcaatacgctgatt
gtggtggaacatgacgaggataccatgcgtgcctctgattatattgtggatgtcggcccg
ggtgcagggattcacggaggggaaatcatcaaggcaggaacgccggaggaagtcatggcc
tgtccggattccgtcacgggccagtatctctccggaaagcgttccattccggtaccggtg
aagcgcaggaaaggcaacggcaacacgctgaagatcgtgaaagccacccagaacaacctc
aagggtgtgaatgcaacgatccgtctgggaacccttacggtggtgaccggtgtctccgga
tccggcaagtcttctctggtgacggaagttctgacaaagggcgtggaacatgccctgggg
aaactgcgggtgaaacccggtgcctgccgggagatccagggactggagaatattgacaag
ctggttgtgataggacaggaaccaatcggccggacaccgcggtccaaccctgcgacgtat
acaggcgtattcgatgacatccgggatctgtttgcacagacacgggaggcgaagcttctg
gggtacgacaagggaaggttttccttcaatgtaaaaggcggacgctgtgaatcgtgccag
ggggatggaatcaagaggatttccatgcacttcctgccggatgtgtatgtcccctgtgat
gcctgtcacgggaagcggtacaacgaagagacactgcaggtgaaatacaaggacaagacg
atcgcggatgtcctggatatgacggtggaggaagccgtggtattcttcgacggcatttcc
cggatccggcacaagctgcagacgctgaaggatgtcggcctgtcctatatcaaactgggg
cagagtgccacaacgctgtctggcggagaagcgcagcgggtgaagctggcgagcgaactg
cagaaaaaacctacagggaaaaccctctttgtcctggatgaacccaccacggggctgcat
tctgcggacgtggaaaaactcattgaagttttacagaggcttgtagataatggggatacg
gtgctcgtgatcgagcacaacctggatgtgatcaagaacgcggatcagatcatagatatt
ggaccggagggtggagatgcagggggccggatcgtggctgccggcacaccggaacaggtg
gcaaaagtgcctgaaagctggaccggtcagtacctgaagccgctgctggaaaggaagtga
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