Faecalibaculum rodentium: AALO17_04710
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Entry
AALO17_04710 CDS
T04268
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fro
Faecalibaculum rodentium
Pathway
fro03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fro00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AALO17_04710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fro03021
]
AALO17_04710
03400 DNA repair and recombination proteins [BR:
fro03400
]
AALO17_04710
Enzymes [BR:
fro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AALO17_04710
Transcription machinery [BR:
fro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AALO17_04710
DNA repair and recombination proteins [BR:
fro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AALO17_04710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
DUF6235
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AMK53605
UniProt:
A0A140DSH8
LinkDB
All DBs
Position
422966..423919
Genome browser
AA seq
317 aa
AA seq
DB search
MNTFKIDTLETSQTSGSFRMSPLPDHFGITLGNALRRVLLSAVPGGAVFSIRIDGVFHEF
TGIKGVTEDVAQIILQIKQLILKIDINDNDIYKLRINAVGPCTVTAGDIECPEGVEVLNK
DLPICTLAQGGSINIEMQARLGRGYVGAETNKHIYQNDGQPLGIIYTDALYSPVKRVAYK
SEPELDEAGAAYDTLTMEIDTDGTLSPEEALSIASKILRDHLAILQNLDEAVVDNPAAVE
TVTEETSSGLQHKLIEDLELSVRSYNCLKRAGITTVEELIDKTEDELMHVRNLGKKSLKE
VKEKIYSLGLSFKAGNE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgtttaagatcgacaccctggagaccagccagacttccggatcgtttcgaatg
agcccgctgccggatcatttcggcatcactctgggcaacgccctgcggcgtgtactgtta
tccgcagtgccgggaggtgctgtgttctcgattcggatcgacggcgtattccatgaattc
accggcatcaaaggcgtgacggaagatgttgcacagatcattctgcagatcaaacagctg
atcctgaagattgacatcaatgacaatgacatctacaaactgcgcatcaatgcggtgggt
ccgtgcacggtcacggccggtgacatcgaatgtcccgaaggtgtggaggtcctcaacaag
gatctgcccatctgcaccctggcacagggggggtccatcaacattgagatgcaggcccgg
ctgggacgcggctatgtaggtgccgaaaccaacaagcacatctaccagaatgacggacag
cctcttggaattatttatacagacgctttgtattcaccggtgaaacgcgtcgcctacaaa
agcgagccggaactggatgaagcaggcgctgcgtatgacacactgacgatggaaatcgac
acagacggaacactgagcccggaagaagcgctttccatcgcctcgaaaatcctcagggat
cacctggcgattcttcagaacctggatgaagcagttgtggacaaccccgcagcagtggaa
accgtcactgaagaaacatcatccggactgcagcacaagctcatcgaagacctggaactg
tcggttcgttcctataactgcctcaagcgggcaggcattaccacggtggaggaactgatc
gacaagaccgaagacgaactgatgcatgtacggaatctgggtaaaaaatccctgaaggaa
gtcaaagaaaaaatctactcccttggactcagcttcaaggcgggcaacgaataa
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