KEGG   Faecalibaculum rodentium: AALO17_06780
Entry
AALO17_06780      CDS       T04268                                 
Name
(GenBank) hypothetical protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
fro  Faecalibaculum rodentium
Pathway
fro03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fro00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AALO17_06780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fro03019]
    AALO17_06780
Messenger RNA biogenesis [BR:fro03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AALO17_06780
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2
Other DBs
NCBI-ProteinID: AMK53812
UniProt: A0A140DT35
LinkDB
Position
complement(599042..600955)
AA seq 637 aa
MAEYKKHKNDNKEAGLPARPETAVRKTDTLVYALGGLGEVGKNMYCYEHENEICIVDCGV
LFPGDELLGIDYVIPDYHHLIRQDKKRKILVITHGHEDHIGGIPFLLRQVNIDAIYAPRF
AKALIQKKLAEHKGLEKTKIIEIDSDYRIRAKYFTVGFFDTIHSIPDSLGVLITTPNGSI
VHTGDFKFDLTPVGRNADYQKMAYIGALKPTLLMSDSTNAGVEDFSISEKDVSREIMGIM
RNAKHRMIIATFASNVYRVGQIIEAALATGRKVAVFGRSMENVVDIARKMGTIKIKDSQL
LSHEDLARTPDDKVCIICTGSQGEPLAALSRIAAGTHRFIHLKPSDTVVFSSGTIPGNDA
AVNAVVDKLFRSGATVLNKSILTNLHTTGHASKEEEKLMLQLVKPEYFMPIHGEYKMLMQ
HRQTAIETGMPPENIFVCANGDVLLLRDHKVIASDWRFQGDDIYVDGNDISGLSTAVLKD
RRILADNGLVAVIVAIDSKENKLLARPVIVSRGFVFIKDSQSLIKEAEFIVANSLSERMK
ERTTFSDIKNCIRSTLEPFLYKKTRRNPIVIPVILNSRQTMEELKKRRAQQAGHASHKTA
HRKSEKPQGSRKQGAQKEKSVRALPQPRQKKETGHQA
NT seq 1914 nt   +upstreamnt  +downstreamnt
atggctgaatacaaaaaacacaagaatgataataaggaagccggcctgcctgcccgtccc
gagacagctgtgcgcaaaaccgacacactggtctatgccctgggcggtcttggagaagtc
ggcaagaacatgtactgctacgagcatgagaacgaaatctgcatcgtggactgcggggtc
ctgtttcccggcgacgaactgctgggcattgattatgtgatccccgactatcatcacctg
atccgccaggacaagaagcggaagatcctggtcatcacccatggccatgaagaccacatc
ggcgggattcccttcctgctgcggcaggtgaacatcgacgcaatctatgcaccgcggttc
gccaaggcgctgatccagaaaaagctggctgagcacaagggtctggagaaaacgaaaatc
atagaaatcgattccgactaccggatccgggccaagtacttcaccgtcggattcttcgac
accatccattccatccccgattccctgggtgtgctcatcacgacccccaacggcagcatc
gtgcacaccggagacttcaagtttgacctgacgcccgtgggccgcaatgcggactaccag
aaaatggcctacatcggggcactgaagcccacgctgctcatgtcggacagcaccaacgcc
ggtgtggaggatttctccatctccgaaaaggatgtctcccgggaaatcatgggcatcatg
cgcaacgcgaaacaccgcatgatcattgccacattcgcctccaatgtctaccgcgtgggg
cagatcatcgaggcagcccttgccaccggacgcaaggtggcggtattcggacggtccatg
gaaaatgtcgtggacattgcgcggaaaatgggaaccatcaaaatcaaggattcccagctt
ctgtcccatgaggacctggcacggacaccggatgacaaggtgtgcatcatctgtacggga
tcccagggcgagccgctggcagccctgagccggatcgcggcgggtacacaccggttcatt
cacctgaaacccagcgatacagtggtattctcctccggcacgatccccggcaacgatgcg
gcggtcaacgccgtggtggacaagctgttccgctccggtgccacggtgctcaacaagtcc
atcctgaccaacctgcacaccacgggccacgcctccaaggaagaggaaaagctcatgctg
cagctggtgaagcccgaatactttatgcccattcacggggagtacaaaatgctcatgcag
caccggcagacagccatcgaaaccggcatgccgcctgaaaacatttttgtctgcgccaat
ggcgatgtcctgctgctgcgtgaccacaaggtgattgccagcgactggcgcttccagggc
gatgatatttatgtggatggaaacgacatctcgggtctctccacggcggtcctcaaagac
cggcggatcctggcggacaacgggcttgtggccgtgatcgttgccattgactcgaaggaa
aacaaactgctggccagaccggtgatcgtgtcccggggctttgtcttcatcaaggattcc
cagtccctgatcaaggaggcggaattcatcgtggccaactccctgtcagagcgcatgaag
gagaggaccaccttctcggacatcaagaactgcatccgcagcacgctggagccgtttctg
tacaagaagaccaggcgcaatcccatcgtgatcccggtgatcctgaactcccggcagacg
atggaagaactgaagaaacgccgggcgcagcaggccggtcacgcctcccacaagacggca
caccgcaaaagcgaaaagccgcagggatcccggaaacagggggcacaaaaagagaaatcc
gtccgtgcccttccccagccccggcagaaaaaagaaaccggccatcaggcataa

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