Faecalibaculum rodentium: AALO17_06780
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Entry
AALO17_06780 CDS
T04268
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
fro
Faecalibaculum rodentium
Pathway
fro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AALO17_06780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fro03019
]
AALO17_06780
Messenger RNA biogenesis [BR:
fro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AALO17_06780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Motif
Other DBs
NCBI-ProteinID:
AMK53812
UniProt:
A0A140DT35
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All DBs
Position
complement(599042..600955)
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AA seq
637 aa
AA seq
DB search
MAEYKKHKNDNKEAGLPARPETAVRKTDTLVYALGGLGEVGKNMYCYEHENEICIVDCGV
LFPGDELLGIDYVIPDYHHLIRQDKKRKILVITHGHEDHIGGIPFLLRQVNIDAIYAPRF
AKALIQKKLAEHKGLEKTKIIEIDSDYRIRAKYFTVGFFDTIHSIPDSLGVLITTPNGSI
VHTGDFKFDLTPVGRNADYQKMAYIGALKPTLLMSDSTNAGVEDFSISEKDVSREIMGIM
RNAKHRMIIATFASNVYRVGQIIEAALATGRKVAVFGRSMENVVDIARKMGTIKIKDSQL
LSHEDLARTPDDKVCIICTGSQGEPLAALSRIAAGTHRFIHLKPSDTVVFSSGTIPGNDA
AVNAVVDKLFRSGATVLNKSILTNLHTTGHASKEEEKLMLQLVKPEYFMPIHGEYKMLMQ
HRQTAIETGMPPENIFVCANGDVLLLRDHKVIASDWRFQGDDIYVDGNDISGLSTAVLKD
RRILADNGLVAVIVAIDSKENKLLARPVIVSRGFVFIKDSQSLIKEAEFIVANSLSERMK
ERTTFSDIKNCIRSTLEPFLYKKTRRNPIVIPVILNSRQTMEELKKRRAQQAGHASHKTA
HRKSEKPQGSRKQGAQKEKSVRALPQPRQKKETGHQA
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatacaaaaaacacaagaatgataataaggaagccggcctgcctgcccgtccc
gagacagctgtgcgcaaaaccgacacactggtctatgccctgggcggtcttggagaagtc
ggcaagaacatgtactgctacgagcatgagaacgaaatctgcatcgtggactgcggggtc
ctgtttcccggcgacgaactgctgggcattgattatgtgatccccgactatcatcacctg
atccgccaggacaagaagcggaagatcctggtcatcacccatggccatgaagaccacatc
ggcgggattcccttcctgctgcggcaggtgaacatcgacgcaatctatgcaccgcggttc
gccaaggcgctgatccagaaaaagctggctgagcacaagggtctggagaaaacgaaaatc
atagaaatcgattccgactaccggatccgggccaagtacttcaccgtcggattcttcgac
accatccattccatccccgattccctgggtgtgctcatcacgacccccaacggcagcatc
gtgcacaccggagacttcaagtttgacctgacgcccgtgggccgcaatgcggactaccag
aaaatggcctacatcggggcactgaagcccacgctgctcatgtcggacagcaccaacgcc
ggtgtggaggatttctccatctccgaaaaggatgtctcccgggaaatcatgggcatcatg
cgcaacgcgaaacaccgcatgatcattgccacattcgcctccaatgtctaccgcgtgggg
cagatcatcgaggcagcccttgccaccggacgcaaggtggcggtattcggacggtccatg
gaaaatgtcgtggacattgcgcggaaaatgggaaccatcaaaatcaaggattcccagctt
ctgtcccatgaggacctggcacggacaccggatgacaaggtgtgcatcatctgtacggga
tcccagggcgagccgctggcagccctgagccggatcgcggcgggtacacaccggttcatt
cacctgaaacccagcgatacagtggtattctcctccggcacgatccccggcaacgatgcg
gcggtcaacgccgtggtggacaagctgttccgctccggtgccacggtgctcaacaagtcc
atcctgaccaacctgcacaccacgggccacgcctccaaggaagaggaaaagctcatgctg
cagctggtgaagcccgaatactttatgcccattcacggggagtacaaaatgctcatgcag
caccggcagacagccatcgaaaccggcatgccgcctgaaaacatttttgtctgcgccaat
ggcgatgtcctgctgctgcgtgaccacaaggtgattgccagcgactggcgcttccagggc
gatgatatttatgtggatggaaacgacatctcgggtctctccacggcggtcctcaaagac
cggcggatcctggcggacaacgggcttgtggccgtgatcgttgccattgactcgaaggaa
aacaaactgctggccagaccggtgatcgtgtcccggggctttgtcttcatcaaggattcc
cagtccctgatcaaggaggcggaattcatcgtggccaactccctgtcagagcgcatgaag
gagaggaccaccttctcggacatcaagaactgcatccgcagcacgctggagccgtttctg
tacaagaagaccaggcgcaatcccatcgtgatcccggtgatcctgaactcccggcagacg
atggaagaactgaagaaacgccgggcgcagcaggccggtcacgcctcccacaagacggca
caccgcaaaagcgaaaagccgcagggatcccggaaacagggggcacaaaaagagaaatcc
gtccgtgcccttccccagccccggcagaaaaaagaaaccggccatcaggcataa
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