Faecalibaculum rodentium: AALO17_08500
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Entry
AALO17_08500 CDS
T04268
Name
(GenBank) helicase, putative, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
fro
Faecalibaculum rodentium
Pathway
fro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AALO17_08500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fro03400
]
AALO17_08500
Enzymes [BR:
fro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AALO17_08500
DNA repair and recombination proteins [BR:
fro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AALO17_08500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
SH3_13
OB_YrrC
UvrD_C_2
HHH_RecD2
Viral_helicase1
AAA_11
PIF1
AAA_16
AAA_22
AAA_5
UvrD_C
AAA
UvrD-helicase
AAA_28
nSTAND3
Herpes_Helicase
CPT
Helicase_RecD
TsaE
NPHP3_N
AAA_12
DUF4926
Motif
Other DBs
NCBI-ProteinID:
AMK53984
UniProt:
A0A140DTK7
LinkDB
All DBs
Position
771318..773486
Genome browser
AA seq
722 aa
AA seq
DB search
MPEETRTGRLEHIIFQNEANSYVVASFYDESDRHSFTGAGRLADPEEEQVYELTGEEVHH
PRFGRQFRILTGRRKLPDESEAIIRFLAGKAFPGIGTATARIVVDTLGEDCLEMIRRDAS
ILQRVPSLSKARQEILVQGLRDYAGDSETYIKLLEWGVAPRQIALLQDHYQDVLKVLDEN
PFRPLYEVNGFGYQSALKLADALNLREDDLRRLDGLLFRNARELSMKTGSTWLSMARMWD
SVQGLEPEIFEAALARLETAGALELENGRIYPFGLCSEEKEIARGIANHMFDVDPPDSKD
LETRIRQTEFSLGIEYDVRQKDAIREFFSRSVLVLNGGPGTGKTTVVRAILSIARSLYPD
MVIQLAAPTGRAAKRLAALSDNDARTIHSLLRWNLEENTFAKGPSDLLECQILIIDESSM
IDTHLFASLILALPDDCRLLLIGDEDQLESVGPGRVFQDLIDSGRIPAVHLERIWRQSEG
SGIITLAREIRDEETCTWEDGVTYLDLPEERILDAILEDVDPEMDPDRFQVLAPMYKGAA
GIEAVNEALQNVFNPPRAGCPELTAGPVTFRKNDKVMLLKNMPDEDVFNGDMGVISGIDS
RTRTITVDFGETEVDFSNDFLYYLSHAWCVSVHKAQGSEYDKVYCITSCRNQAMLSKKLL
YTAISRAKKELILLGDPGVFRSKVRQKTRNHRMTTLKERLWEYISLQPLESDSYDSRNLE
NS
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaaacccgcactggccgccttgaacatatcattttccagaatgaagccaat
tcatacgtagttgcctctttctatgatgaatcagaccgtcattcgttcacaggtgcaggg
cggcttgcggatccggaggaggaacaggtatatgaactgacgggggaagaagttcatcac
ccaagattcggacggcagttcaggatcctgacgggacggagaaaacttccggatgaatcc
gaagccattatccggtttctggccgggaaagcctttccgggaatcggaaccgcgactgca
aggatagtggtggatacactcggtgaagactgcctggaaatgatccggcgagatgcctcg
atcctgcaaagggtccccagtctcagtaaagcaaggcaggaaatcctggtccagggactg
cgtgactacgcaggggacagtgaaacgtatataaaacttctggaatggggagtcgcaccc
agacagatcgcgctgctgcaggatcattatcaggatgtcctgaaggtcctggatgagaat
ccattccggccgctatatgaagtgaacggattcgggtatcagtccgctctcaaacttgcg
gatgccctgaatctcagggaagatgacttgcggcgcctggatggtcttctgttccgcaat
gcaagagagttgtccatgaaaaccggaagcacctggctctccatggcgcgcatgtgggac
agtgtccagggactggagcctgagatattcgaagccgcccttgcacgcctcgaaacagca
ggcgctctggaactggaaaatggccggatttatcccttcggtttatgcagcgaggaaaag
gaaattgcgcggggcattgccaatcacatgtttgacgtggatccgccggacagcaaagac
ctggaaacacgcatccggcagacagagttttcacttggaatcgaatacgatgtccggcag
aaagacgcaattcgtgaattcttttcccgctccgtgctggtcctcaatggcggtccagga
accggaaagacaactgtggtccgggcaatcctgtccattgcccggtccctgtatcccgat
atggtcattcagctggcggccccgacgggtcgcgctgcaaaacggctagcagcattgtcc
gacaacgatgcccggaccatccattcactcctcagatggaacctggaagagaatacattt
gcgaaaggaccgtccgatctgctggagtgccagatcctgatcattgatgaatcctccatg
atagatacacatctgtttgccagcctgatcctggcactgcccgatgactgccggctgctg
ctgatcggcgatgaggaccagctcgaaagtgttggtcccggcagagtgttccaggacctg
attgattcggggcggatcccggctgtgcatctcgaacggatctggcggcagtcggagggg
tcgggaatcatcaccctggccagggagatccgggatgaagagacctgcacctgggaagat
ggagtcacttacctggatcttcccgaagagcggatcctggatgcgattctggaggatgtt
gatccggagatggatccggaccggttccaggtcctggctcccatgtataaaggggcagcc
ggaatcgaggcagtcaacgaagccctgcagaacgtattcaatcccccgcgtgccgggtgc
ccggagctgacggcaggtcctgtgacatttcgaaagaatgacaaagtcatgcttttgaag
aatatgcccgatgaagatgtcttcaatggagatatgggtgtgatatccggcatcgattcc
cgaacccggaccataaccgttgatttcggggagacggaggtggatttcagcaatgacttt
ctttattacctctcccatgcctggtgtgtatccgttcacaaggcacagggctcggaatat
gacaaagtctactgcatcacttcctgcaggaatcaggccatgctgagcaaaaaactgctg
tatacagccatctcgcgggcgaaaaaagaactcattcttcttggggatccgggtgtcttt
cgaagcaaagtccggcagaaaacgagaaatcaccggatgacgacattgaaagaacgtctt
tgggaatacatttccctgcagccactggaatctgattcctatgattcccggaacctggaa
aacagctga
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