Faecalibaculum rodentium: AALO17_09520
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Entry
AALO17_09520 CDS
T04268
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fro
Faecalibaculum rodentium
Brite
KEGG Orthology (KO) [BR:
fro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fro03032
]
AALO17_09520
03400 DNA repair and recombination proteins [BR:
fro03400
]
AALO17_09520
Enzymes [BR:
fro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AALO17_09520
DNA replication proteins [BR:
fro03032
]
Prokaryotic type
DNA Topoisomerases
AALO17_09520
DNA repair and recombination proteins [BR:
fro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AALO17_09520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF1272
Zn_ribbon_PaaD
DNA_ligase_ZBD
ADK_lid
Zn_ribbon_3
PaRep2b
Zn_Ribbon_YjdM
Zn_ribbon_InsA
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AMK54086
UniProt:
A0A140DTV9
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All DBs
Position
875183..877363
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AA seq
726 aa
AA seq
DB search
MKKHLVIVESPSKSKTIEKYLGSGYKVVSSKGHICDLSTSGKDRLGVDVEHDFKPTYRVP
KEKKETVKELRELAEKSQDVYLASDPDREGEAIAWHLARELGLSVDDDNRIVFHEITKPA
IEAAMKEPKKIDMDLVKSQETRRILDRIIGFKLSKLLQNKIQSKSAGRVQSVALRLIVER
ENEIRKFKPEEYWSIHGDITKGRKTFTADLAKVDGKKPKIRNQEEAQAILEDAGTTFTVS
QVKTRSRRKGPKLPFTTSTLQQEASTKLGFGARKTMSVAQKLYEGIDLGDHTEGLISYMR
TDSTRLSGLFVKDAEDAIEKEYGKAYKGKAHMHNSTNAQDAHEAIRPTSINNTPEAVKPY
LTGEQYRLYSLIYARTMASLMADAKFDVTSILFQAGNCEFAATGQVMTFDGYYKVYGKYE
KASTELLPALEEGEVFENVPVISRQHFTEPPARYTEARLIKELEEKSIGRPSTYATIIDT
LQKRGYATLDKVSETSRTKVFTPTEQGVLTDQKLQEFFSKIINVEYTADMEKTLDVIAEG
DEDYIKFLHEFYDDFEPLVDKAYEDMPKKELERVGRTCPQCGGELVYRNGRFGKFISCIN
FPKCRYSETDETDIPEAREHRTCPNCGADMIIKKGRFGPFWACSNYPECKTIVPLKEKAK
PEPTGEKCPECGGDLVRRKSRFGTWFVGCSNYPKCRYIKKEPKKKAPETLDAAEEKTESS
RGEPHA
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagcatctggtaatcgtggagtcaccctccaaatcgaaaacaatagaaaaatac
ctcggaagcggctacaaagtggtttcttccaaaggccacatctgtgacctgtccacatcc
ggcaaggaccgccttggcgtggatgtggaacatgacttcaagcccacgtaccgggttccg
aaggagaagaaggaaactgtcaaggaactcagggaactggcagagaagagccaggatgtc
tatctggcaagcgaccctgaccgggaaggggaagccattgcctggcacctggcccgggaa
ctggggctgagtgtcgacgatgacaatcgcatcgtgtttcatgaaatcacgaagccggcc
atcgaagcggcaatgaaagaacccaagaaaatcgatatggacctggtgaagtctcaggaa
acccgccgcatcctggacaggatcatcggattcaagctctccaagcttctccagaacaag
atccagtcaaaatccgccggccgtgtgcagtcggtggcactgcgtctgattgtggagcgt
gaaaacgagatcaggaaattcaagcctgaagaatactggtcgattcacggtgacatcaca
aagggacgcaagacattcacggcggatctcgccaaagtggacggcaaaaaaccgaaaatc
cgcaaccaggaagaggcacaggccattctcgaggatgcaggcacgacctttaccgtttct
caggtcaagacccgcagccgccgcaaggggccgaagctgcctttcacgacatccaccctg
cagcaggaagccagtaccaaactcgggttcggtgcccggaaaacgatgtccgtggcacag
aagctgtatgagggaatcgacctgggagatcacacagaaggtctgatttcctatatgcga
acggattccacccgtctttccggcctgtttgtgaaggatgccgaggacgcgatcgagaag
gagtatggcaaggcctacaaaggcaaggcgcacatgcataactcgaccaatgcgcaggac
gcacatgaagcgatacggccgaccagcataaacaacaccccggaggcggtaaaaccgtac
ctgaccggggaacagtacaggctgtacagcctgatttacgcccgcaccatggccagtctg
atggccgatgcgaaattcgatgtgacaagcattctgtttcaggccggaaactgcgagttt
gccgcgacaggacaggtcatgacctttgacgggtattacaaggtatatggcaaatacgaa
aaagcatccacggagctgcttccggcgctggaagaaggcgaagtctttgaaaatgtgccc
gtgatttcccgtcagcatttcacggaaccgcccgcccggtatacagaagccaggctgatc
aaggaactggaagaaaagtccatcgggcggccttccacctatgcaacgatcatcgacacg
ctgcagaaacgtggatatgccacgctggacaaagtttcggaaaccagccgcacgaaggtc
ttcactcccacggagcagggagtgctgacagaccagaaactccaggagtttttctcgaag
atcatcaacgtggaatataccgctgatatggagaagacactggatgtgattgcggaaggc
gacgaggactacatcaagttcctgcatgagttttatgatgacttcgaaccgctggtcgac
aaggcatatgaagacatgcccaagaaggaactggagcgggtgggacgcacctgcccgcag
tgcggcggagaactggtctatcgcaatggccgcttcggcaagttcatttcctgcatcaat
ttcccgaagtgccgctattccgaaacggatgaaacggatattccggaagccagggaacac
cggacctgccccaactgcggagcggatatgatcatcaagaagggccgcttcggaccattc
tgggcatgcagcaactatccggaatgcaagacaatcgtcccattgaaggagaaagccaaa
ccggagcccacaggagaaaaatgccccgaatgcggcggtgacctggtgcgccggaaatcc
cgcttcgggacctggtttgtgggctgcagcaactatcccaagtgccggtacatcaaaaag
gagccgaagaaaaaagcccctgagacactggatgcggcagaggaaaagacagaatcttcc
cggggcgaaccccatgcctga
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