Faecalibaculum rodentium: AALO17_10030
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Entry
AALO17_10030 CDS
T04268
Name
(GenBank) DNA-dirted DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fro
Faecalibaculum rodentium
Pathway
fro03030
DNA replication
fro03430
Mismatch repair
fro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AALO17_10030
03430 Mismatch repair
AALO17_10030
03440 Homologous recombination
AALO17_10030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fro03032
]
AALO17_10030
03400 DNA repair and recombination proteins [BR:
fro03400
]
AALO17_10030
Enzymes [BR:
fro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AALO17_10030
DNA replication proteins [BR:
fro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AALO17_10030
DNA repair and recombination proteins [BR:
fro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AALO17_10030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
RMI1_C
HROB
Motif
Other DBs
NCBI-ProteinID:
AMK54137
UniProt:
A0A140DU10
LinkDB
All DBs
Position
918155..921199
Genome browser
AA seq
1014 aa
AA seq
DB search
MQCARNAGMTAAAITDHDAMYGVMEFYHACRNADMKPVFGLETEIQGVRLLVLAKDDQGL
QTLYAWNSRIMEDRVNPPVSRENQPAENEPAPGQFPVFPHCVTIALTIRDRLEEAMIRQD
ERTVREILVGLKETQEEFVTAEAMMDVSARRSRQAWLDVILQDLQLPKAAVSYVLYEQEE
DAALLQVLRAIAENKLATDLTLDVAWHRQFRTLEEMQQLYSPEAMATAQALEDRLHVTMS
MQKSSLPPFSNRLGLSSREFLVRLAKTGLNRRLAGHVPERYRERLEYELDVITRMGFTDY
FLIVYDMIRFARSRGMLTGPGRGSAAGSLVAWSLGITHIDPISSGLLFERFLNPERITMP
DIDTDFPDDRRDEVVQYLRQAYGQTHVAQIAAFSNLKARAVLRDVAKAFGVPARVIDPVT
RLIPNMSGMTMERAWQTVPRLRTLVEAKPGLRKTWAMARRLEGLPRHVTTHAAGVVLSDQ
DIRLVAPLVWMDRNTSATQFSMEHLEELGLIKIDVLSLRNLTIIREVLDQIDNPPDLYTM
PTDDEATWALLDRADTTGVFQLEKEGIRQLLRQMHPRQFEDVAVVLALYRPGPMAEIPHY
LQNRAHPESIVYPHPLLEPVLKETYGVMIYQEQIMETARIIGGFSLGQADILRKAMSKKQ
QDVMGRYREQFLEGALVQGIDAGQAAEIFSLMEKFAGYGFNKSHSYAYGRVAWAMAWLKA
NHPLPFYQSILNHVIGAEVKTGQYLYECRQRRIPVLGPDIRVSSDRWQIENGALRMPLTV
MKGIGTALLPRIVEVQKNGEFPGVIDTIARLWAQKVNESQLRVLVDGGAFDFYGINRATL
RENMTRILNYAHIIRVEKEEVLFDYSIASEPTLVKHREDPMEKSTREKAVFGFYFCEHPV
QTLRKGRFSNTDPIAFIQDVTGFVRILGRVASYHPHKTKKGDLMCFVTVEDETGQIDLAV
MPDTFARQRDLILEGTLLYIQGKKDRPGSVLVRSMEKITSVADTGSQAEQRPDA
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
gtgcagtgtgccaggaatgcagggatgactgctgccgcgatcacggatcatgatgccatg
tatggggtcatggagttttatcatgcctgccggaacgcagacatgaaaccggtgttcgga
ctggaaacggaaatccagggtgtgcggcttctggtgctggcaaaagacgaccagggtctg
cagacattgtatgcctggaattccagaatcatggaagaccgcgtgaatccacctgtgtcc
agggaaaaccagccggcggaaaatgaaccggcacctggacagtttcccgtcttcccgcat
tgcgtgacgattgccctgaccatccgcgaccggctggaagaggcgatgatccgccaggat
gagcggacggtccgggaaatcctcgtgggtctgaaggaaacgcaggaagaatttgtgaca
gccgaggccatgatggatgtatcagccagacgcagccgccaggcctggctggacgtgatt
ctgcaggatctgcagctgcccaaagcggcagtttcctacgtactctatgaacaggaagag
gatgccgctttgctgcaggtgctccgggccattgccgaaaacaagctggcgaccgatctg
acactggatgttgcctggcacaggcagttcaggaccctggaagaaatgcagcagctgtat
tcccccgaagcaatggccacggcacaggctctggaagaccggctgcatgtgacaatgtcc
atgcagaagagcagcctgcctccgttttccaaccggctgggactctccagcagggagttt
ctggtcaggctcgcaaaaaccggcctgaaccggcggctggctggtcacgttccggaacgg
taccgcgaacgcctggagtacgaactggatgtgatcacccgcatgggattcacggactat
tttctcattgtatatgacatgatccggtttgcccgcagccggggcatgctcacagggccg
ggcagagggagtgctgccggcagcctggtggcctggagcctgggaatcacccacatcgat
cccatttcctccgggctgctctttgaacggttcctgaatccggagcggatcaccatgccg
gatatcgatacggatttcccggatgaccgccgcgacgaagtggtgcagtatctccggcaa
gcctatggccagacccacgtggcacagatcgcggccttttccaacctgaaagcccgggca
gtgctgcgggatgtggccaaagccttcggcgtccccgcacgggtgatcgacccggtcacc
cggctgatcccgaacatgtcgggcatgaccatggagcgtgcctggcagacggtcccccgc
ctgaggacactggtggaagcgaagcccggtctcaggaaaacctgggccatggcccgcaga
ctggaaggcctcccccggcatgtcacgactcatgccgctggtgtcgtgttgtcagaccag
gacatccggcttgtggcacctcttgtctggatggacaggaacaccagcgccacacagttt
tccatggagcacctggaggaactgggcctgatcaaaatcgatgtgctgtccctgcgcaat
ctcaccatcatccgggaagtcctggaccagatcgacaatccacccgatctgtacacgatg
cccaccgatgacgaggccacctgggcactgctggaccgggctgacacaaccggtgtgttc
cagctcgaaaaagaagggatccgccagctcctgcgccagatgcacccccgtcagtttgaa
gatgtggcggttgtccttgcgctttaccgcccgggccccatggccgaaataccgcattac
ctgcagaaccgtgcacatccggagtccattgtctatccgcatccactgctggaacccgtg
ctgaaggaaacatatggggtcatgatctaccaggaacagatcatggaaaccgcccggatc
attggcgggttcagtctgggtcaggcggatatcctgcgcaaggcaatgtccaagaaacag
caggatgtgatgggccggtaccgggagcagtttctcgagggagccctggtgcaggggatc
gatgccgggcaggcagcggagattttcagcctgatggaaaaattcgccggctatggattc
aacaagtcgcactcctatgcctatggacgtgtggcctgggccatggcctggctcaaggcc
aatcatcctctgccgttttaccagagcatcctgaatcacgtgatcggtgccgaggtgaaa
accgggcagtacctgtacgaatgccgccagcgccggatcccggtgcttggaccggatatc
cgggtttcctcagaccgctggcagattgaaaacggagccctgcgcatgccactgacagtc
atgaagggcatcgggaccgcactgctgcccaggatcgtggaagtgcaaaaaaacggtgaa
ttcccgggcgtgatcgacaccattgccaggctctgggcacagaaagtcaatgaaagtcag
ctgcgggtcctggtggacggaggagcctttgatttttacggcatcaaccgcgcgacgctg
cgggagaacatgaccaggatcctgaactatgcccacatcatccgggtcgagaaggaggaa
gtgctctttgactactccattgccagtgaaccgacgctggtgaaacaccgggaagatccc
atggagaagagcacacgggagaaggccgtgttcgggttttatttctgtgaacatccagta
cagacgctgcggaagggacgcttttccaatacagaccctattgccttcatacaggatgtg
acgggatttgtccggatcctgggacgggttgcatcctatcatcctcacaaaacgaagaaa
ggcgacctgatgtgcttcgtgacggtggaggacgaaacgggccagatcgatctggcggtt
atgccggatacctttgccagacagcgcgatctgatcctggaaggcacgctgctgtatata
cagggaaagaaggaccggcccggttccgtgctggtgcgctccatggagaaaatcacctcc
gtcgcagataccggcagccaggcagaacagcggcccgatgcatag
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