Faecalibaculum rodentium: AALO17_11010
Help
Entry
AALO17_11010 CDS
T04268
Name
(GenBank) hypothetical protein
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
fro
Faecalibaculum rodentium
Brite
KEGG Orthology (KO) [BR:
fro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fro03019
]
AALO17_11010
03009 Ribosome biogenesis [BR:
fro03009
]
AALO17_11010
Enzymes [BR:
fro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AALO17_11010
Messenger RNA biogenesis [BR:
fro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AALO17_11010
Ribosome biogenesis [BR:
fro03009
]
Prokaryotic type
rRNA helicases
AALO17_11010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AMK54235
UniProt:
A0A140DUA8
LinkDB
All DBs
Position
1009035..1010342
Genome browser
AA seq
435 aa
AA seq
DB search
MNIEGFKKLTPIQESVVHRKDPDRDLVGISSTGSGKSHAFFMPVFDKIDPSRDQVQAVIS
VPTRELAYQLYERAKNLAAHFGIRVKLVTGGMDRHKVGTQKPHLVIGTPGRMKDLFLDDK
TLRLDTAKVMIIDEADMTMEFGFLEDVDQILSKMGEDTQLMVFSATIPENLQPFLKKYLH
NPEIITIDTNEEFQSDVTNYLVPARHMSYEEKLLQILPAINPYIALIFANTTEEAAQVAE
GMRREGYDLVELHSGMESRARAQAIRQIQSQKKSYIVASDIASRGIDLEGISHVISLGFP
KDLKFFFHRIGRTGRAGRDGLAITIYQDSDRRSIDSLAHKGVQWKHKDVKRGQWVDLKPL
EGRKRKGTDPLQAEISRIVKAGKKERVKPNYKKKQKQQIEQLRRKRKRQIIQEDIRRQKK
ERAKEKQKARRQGSK
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaacatagagggcttcaagaagctcacacccattcaggaatccgtggtccatcgaaag
gatccggaccgtgacctggtgggcatttccagcacaggatccgggaaatcccatgcgttt
ttcatgcctgtctttgacaaaatcgatccgtccagagaccaggtacaggctgtgatttcg
gtccccacacgagagctggcctaccagctgtatgagcgggccaaaaacctcgccgctcac
tttggcatccgcgtgaagctggtaaccggcggcatggaccgccacaaggtgggaacacag
aaaccgcatctggtgatcggcacaccggggcggatgaaagacctgttcctggatgataaa
acgctgcggcttgacaccgcaaaggtaatgatcatcgacgaagccgacatgaccatggag
ttcggcttcctggaagacgtcgaccagattctgtccaaaatgggagaggatacgcagctg
atggtcttttccgccacgattccggaaaacctgcagccgtttctgaagaaatatctgcac
aatcccgaaatcatcaccatagacacgaatgaggaatttcagagtgatgtgacaaactac
ctggttccggcccggcatatgagttacgaggagaaactgctgcagatcctcccggccatc
aatccgtacattgcactgatttttgccaacacgactgaagaagccgcccaggtggccgag
ggaatgcgccgcgaaggatacgaccttgtggagctgcattccggcatggagagccgggcc
agggcacaggcgatccgacagattcagtcccagaaaaagtcgtatatcgtggccagtgac
atagccagccgcggcattgacctggagggcatttcccatgtcatttctctgggattcccg
aaggacctgaagttcttcttccacaggatcggacgcacaggccgtgccggtcgggacggc
ctggccatcacgatctaccaggacagcgaccgccgttccattgattccctggcgcacaaa
ggcgtgcagtggaagcacaaggacgtcaagcggggacagtgggtggacctgaagccgctg
gaaggccgcaaaaggaaagggaccgatcccctgcaggctgaaatttcccggattgtaaaa
gccggcaagaaggaacgcgtgaagccgaattacaagaagaagcagaaacagcagattgaa
cagctgcgaaggaaacgcaaacggcagatcatccaggaggatatccggcgccagaaaaaa
gaacgcgcaaaagaaaagcagaaagccagaagacagggcagcaaatga
DBGET
integrated database retrieval system
