Faecalibaculum rodentium: AALO17_14570
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Entry
AALO17_14570 CDS
T04268
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
fro
Faecalibaculum rodentium
Pathway
fro03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AALO17_14570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fro03400
]
AALO17_14570
DNA repair and recombination proteins [BR:
fro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AALO17_14570
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG_UvrC
UvrC_RNaseH
UvrC_M
GIY-YIG
UVR
HHH_2
HHH_5
DUF7508
ACC_epsilon
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
AMK54591
UniProt:
A0A140DVB4
LinkDB
All DBs
Position
complement(1332697..1334670)
Genome browser
AA seq
657 aa
AA seq
DB search
MITEHLQHKLSLLPDKPGCYIMKDENGSILYVGKAKVLKNRVRSYFHGAHDMKTTRLVSH
IRDFEFIVTDSEKEALLLEINLIKLHRPPYNIMFMDDKSYPYIEVTGTNPVAVRRTRRLT
NKTSQYFGPYPNASSAFEIVRLINRIFPIRKCRTLPKQVCLYYHMHQCLGPCVQKIPDEE
DAEIRRQIIRFLKGDAGDILQDLENRRDALSMELQFERAAQVQTQIESLQHVMEKQTIDF
ADRTDRDVFGWYEDKGYLSIYGLILREGKLLERTLSVAPVYGDSQEEFESFILQYYQNNI
VPREILVPQGTDAAGLEEALSEEGGGRKTHVRIPLRGDKKKLADLAAENARTAHEQKFQL
AYKKDQELAEANSGLSQIFGKPVHTVELFDNSHLQGSENVSGLVVFRDGSPDKTQYRHYK
LDGYRSDLDSMKEVLYRRYFRLLQQDRPMPDLLLVDGGLQQVQAASAIKQDLGLDLTIGG
LVKDDRHSTRGLLREDGTEVPLDRKEPLFFLLTRMQDEVHRFAISYHRQRRSKRMTRSIL
DEVPGIGPARKQELQKKFKSMKRMKSATLEELEEVLPHDVALRLKERLQQSSVQPGMPMG
SAPEADDRNAEDAELAALAAQLAALDAARNPDSPEAEEAGSDEKESGREESRPDMVK
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgatcacagaacatctgcagcacaagctctcgctgctgcccgacaaacccggatgctac
atcatgaaggacgagaacggctcaattttgtatgttggcaaggccaaagtgctgaaaaac
cgggtgcggtcatatttccatggcgcgcatgacatgaaaaccacccggctggtttcgcac
atccgggacttcgagttcatcgtcacggactccgagaaggaagccctgctgctggaaatc
aacctcatcaagcttcaccggccgccgtacaacatcatgttcatggatgacaaaagttat
ccctacattgaagtgaccggcaccaatcccgtcgccgtgcgtcgaacacgtcggctgacg
aacaaaaccagtcagtatttcgggccgtaccccaatgcctccagcgcctttgaaatcgtg
cggctgatcaaccggatctttcccatccggaagtgccggacactcccgaaacaggtgtgt
ctgtactaccacatgcatcagtgcctgggtccctgcgttcagaagatccccgatgaggag
gatgcagagatccggcggcagatcatccggttcctgaaaggcgatgccggggatatcctg
caggatcttgagaatcggcgggatgccctgtccatggagctgcagttcgaacgcgctgcc
caggtgcagacgcagatcgagtcgctgcagcatgtgatggagaaacagaccatcgacttt
gcggaccggacagaccgggatgtcttcggatggtatgaagacaagggctacctgagcatc
tatggtctgatcctgcgggaaggaaagctcctggagcgcaccctgagcgtggcaccggtc
tacggcgacagccaggaggagttcgagtcgttcattctccagtactatcagaacaacatc
gtcccccgggaaatcctggttccgcagggcacggatgcagcaggcctggaagaagccctg
tcggaagaaggcggcggcaggaaaacccatgtccgcatcccgctgcggggtgataagaaa
aaactggcggatctggcggccgagaacgcccggacagcccatgaacagaagttccagctg
gcatacaaaaaggaccaggaactcgcggaagccaacagcggactctcgcagatcttcggc
aagccggtccacaccgtggagctcttcgacaactcccatctgcagggatcggaaaatgtc
tccggtctggtggtgttcagggatggctccccggacaagacgcagtaccggcattacaaa
ctggacggctaccgttcagatctggattccatgaaggaagtgctgtatcggcgctatttc
cgccttctccagcaggacaggcccatgcccgatctcctgctcgtggacggcggcctccag
caggtccaggcggcatcagccatcaaacaggacctggggctggacctgaccattggcggt
ctggtcaaggatgaccggcattccaccaggggtctgctccgggaagacggaacggaagtc
ccgctggaccggaaggagccgctgtttttcctgctgacccgcatgcaggatgaagtgcac
cggttcgccatatcctaccaccggcagagacggtcgaaacgcatgacccgcagcattctg
gatgaagtcccgggaatcggtccggctcggaagcaggaactgcagaagaagttcaaaagc
atgaagcgcatgaaatccgccacgctggaggagctggaggaagtgctgccgcatgatgtg
gccctgcgcctgaaggaacgcctgcagcagtcttctgtacaacccgggatgccgatggga
tccgctcccgaagcggatgacaggaatgcggaagatgcagaactggcagcgctggcggct
cagctggccgcactggatgcagccaggaatccggatagtcctgaagcggaagaagccggg
tctgatgagaaggaatcgggcagggaagagtctcggcccgatatggtaaaataa
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integrated database retrieval system
