Frondihabitans sp. PAMC 28766: AX769_01890
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Entry
AX769_01890 CDS
T04281
Name
(GenBank) RNA helicase
Organism
frp
Frondihabitans sp. PAMC 28766
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
CMS1
Motif
Other DBs
NCBI-ProteinID:
AMM19115
UniProt:
A0A126YY17
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Position
complement(397595..399988)
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AA seq
797 aa
AA seq
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MSPFDKNASARPAKVRPSSKSPKHRGYKPEPEGGPAKKRWDAPERAARGASRGDAPRGGR
SADNASGRPNWEPRKAGGSNPRFGGAREDRDARNGARGRDSFERPSRGGYNDERPSRGGY
NRDERPAGGDRFSAGRPARDERPARDSRPSRDDRFGGGRPARDDRGGRSDDRGLRSYDRN
DRPARSNDRPARSNDRPARSYDRPEGGRPGREDRAPFKRRDDYGSGRPSRDDRAPRSFDR
DDRSARPARDDRAPRSYDRDDRSARDDRAPRSFNRDDRPSRPSRDDRAPRSFDRADSDGR
SGAGRPARNDRPERSGAPREFDRDDRGNRPTRSYGGNGSYGSDRSDRSSDRPRGNDRSYG
DDRAERGSDFYPKRDNAPHYSPEDDVKLEKLQAEVVTAGEVAGKTWGDLGLGDNITRQLI
TMGAPAPFPIQAATIPDVIAGKDVLGRGRTGSGKTIAFGAPLAEKLLEHGGAKDRKPGRK
PRALILAPTRELAMQIDRTVQPIARSVGLFTTQIYGGVPQQRQVHALQRGVDIVIGTPGR
IEDLIEQGRLDLSHVTVTVLDEADHMCDLGFLEPVQRIIRETADVTPHGARAQKLLFSAT
LDKGVAKLVDEFLVDPAVHEVAGEDQASSTIDHRVLLIEQRDKTAVIEQLSQGRGKTLVF
ARTRAFAEQLADQLEDAGIATTSLHGDLNQARRTRNLELLTSGRVNVLVATDVAARGIHV
DDIELVIQADAPDEYKTYMHRSGRTGRAGKEGTVVTLITRNRRRRMEELLERAEISADMV
DVRPGDALIDQLADANR
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctttcgacaagaatgcttcggcgcgccccgccaaggtccgccccagctcgaag
agccccaagcatcgcggctacaagcccgagcccgaaggcggccccgccaagaagcgttgg
gacgcccccgagcgtgccgcccgcggcgcttcgcgcggcgacgccccccgtggcggacgc
tcggccgacaacgcgtcgggtcgccccaactgggagccgcgcaaggccggcggctccaac
ccccgcttcggaggcgcccgtgaagaccgcgacgcccgcaacggcgctcgcggccgcgac
tcgttcgagcgcccctcgcgcggcggctacaacgacgagcgcccctcgcgtggcgggtac
aaccgcgacgagcgtcccgccggcggcgaccgcttcagcgctggtcgtccggcccgcgac
gagcgtccggctcgcgacagccgcccctcgcgtgacgaccgtttcggcggcggacgcccg
gcgcgtgacgaccgcggcggtcgctccgacgaccgcggcttgcgctcgtacgaccgtaac
gaccgcccggcccgctcgaacgaccgcccggcccgctcgaacgaccgccccgcccgctcg
tacgaccgccccgagggtggccgcccgggccgcgaggatcgcgcgccattcaagcgccgc
gacgactacggctccggccgcccgtcgcgcgacgaccgcgccccacgcagcttcgaccgt
gacgatcgctccgcgcgccccgcgcgcgacgaccgagcgccccgctcgtacgaccgcgat
gaccgctcggctcgtgacgaccgcgccccgcgcagcttcaaccgtgacgaccgtccgtcg
cgtccgtcgcgcgacgaccgcgccccgcgctcgttcgaccgcgctgactcggatggccgt
tccggcgctggccgccccgcccgtaacgaccgcccggagcggtctggcgccccgcgcgag
ttcgaccgcgacgatcgcggcaaccgcccgacccgctcgtacggcggcaacggctcctac
ggaagcgaccgcagcgaccgcagctccgaccgcccccgcggcaacgaccgcagctacggc
gacgaccgcgccgagcgcggcagcgacttctacccgaagcgcgacaacgctccccactac
agccccgaagacgacgtcaagctcgagaagctgcaggccgaggtcgtcacggccggcgag
gtcgcgggcaagacgtggggcgacctgggtctcggcgacaacatcacccgccagctgatc
acgatgggcgcccccgcgcccttcccgatccaggcggcgaccatccccgacgtgatcgcg
ggcaaagacgtcctcgggcgcggccgcaccggctcgggcaagaccatcgccttcggtgcg
cccctcgccgagaagctcctcgagcacggtggcgcgaaagaccgcaagccgggtcgcaag
ccccgcgcgctgatcctggcccccacccgtgagctcgcgatgcagatcgaccgtaccgtg
cagcccatcgcgcgttcggtcggcctcttcaccacgcagatctacggcggagtgccgcag
cagcgtcaggtgcacgccctccagcgcggcgtcgacatcgtgatcggcacgcccggccgc
atcgaagacctcatcgagcagggtcgtctcgacctcagccacgtcaccgtgacggtgctc
gacgaggccgaccacatgtgcgacctcggcttcctcgagccggtgcagcgcatcatccgt
gagaccgccgacgtcacgccgcacggtgcccgcgcacagaagctgctcttcagcgccacc
ctcgacaagggtgtggcgaagctggtcgatgagttcctcgtcgatcctgccgtccacgaa
gtcgccggcgaagaccaggcgtcgtcgacgatcgaccaccgcgtgctgctcatcgagcag
cgcgacaagacggccgtcatcgagcagctctcgcagggccgcggcaagacgctcgtcttc
gcccgcacccgcgcgttcgccgagcagctcgccgaccaactcgaagacgccggcatcgcg
acgacgagcctccatggagacctcaaccaggcgcgccgcacgcgcaacctcgagctgctc
acgtcgggccgcgtcaacgtgctcgtcgccaccgacgtcgccgcccgcggcatccacgtc
gacgacatcgagctggtcatccaggccgacgcccccgacgagtacaagacgtacatgcac
cgctcgggccgcactggccgcgccggcaaggagggcaccgtggtcaccctgatcacgcgc
aaccgccgccgccgcatggaagagctgctcgagcgcgccgagatctcggccgacatggtc
gacgtccgccccggcgacgcgctgatcgaccagctggccgacgcgaaccgctag
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