Frondihabitans sp. PAMC 28766: AX769_03450
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Entry
AX769_03450 CDS
T04281
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
frp
Frondihabitans sp. PAMC 28766
Pathway
frp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
frp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AX769_03450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
frp03400
]
AX769_03450
DNA repair and recombination proteins [BR:
frp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AX769_03450
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AX769_03450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
AAA_29
DnaJ_CXXCXGXG
nSTAND1
AAA_16
AAA_25
DUF4350
RsgA_GTPase
Viral_helicase1
BCA_ABC_TP_C
DUF463
Motif
Other DBs
NCBI-ProteinID:
AMM19360
UniProt:
A0A126YWH0
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All DBs
Position
703831..706446
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AA seq
871 aa
AA seq
DB search
MPRTSPTVSDSPHRPGLGRVEVRGAREHNLQSVDVDIPRDALVAFTGVSGSGKSSLAFGT
LYAEAQRRFFESVAPYARRLIDQVGAPDVDRIDGLPPAVALPQQRTGGTARSTVGSATTL
ANVVRMFFSRVGTYPPGAPMLLAEDFSTNTVQGACPTCHGLGRVYDVPEELMVPDDTLSI
RDKAIVAWPTAWHGKQLRDSLVSLGYDIDIPWRDLPRDQRDWALYTDESPQVPIYRDLSP
AQVRKAVAAKAPHSYMGTFLGVKRYVLDTFAGSKSARMRERAAEFMVSVVCPTCAGRRLK
PDALAVTVEGHDITEVSAMPLHDVAGLMEKVLLPGWGSDRATVIAPETRLAAQRLAADLL
SRLAPIVDLGLGYLSLDRTTPTLSSGELQRMRLATQVLSRLFGVVFVLDEPSAGLHPADT
ESLIRILRTLKESGNTVFFVEHSLDVIREADWIVDIGPGAGSTGGTVVYSGPLEGLREAE
ASVTRRYLFGDLAGASTARARRPGDGQLELVGVTRNNLDDVSVAFPLGAFTAVTGVSGSG
KSTLVTHAIPDLLRASLASEVDPEAASDDDEPTTSGQDPLLSAAPDVTVGRASGPEGRLR
RVVQVSQKPIGRTPRSNVATYTGLFDRIRARFAATPEARRRHYGASRFSFNLPAGRCPVC
KGEGTMEVELLFLPTVHAVCSACHGSRYNPDTLEILLDGSTIADVLALSVDRAAEFFASD
EEVARHLDALLDVGLGYVSLGQSATELSGGEAQRVKLATELRRGQRGDTLYLLDEPTSGL
HPADSDRLIGHLQDLVDSGNTVIIVEHDMRVVAQADWVIDLGPGAGAAGGRVLAQGTPEE
VAAHKSSVTAPFLRAALGGDGRAEWRTRQAN
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcacgtctccgaccgtctccgactcgccgcaccggcccgggctcgggcgcgtc
gaggtgcgcggagcgcgagagcacaaccttcagagcgtcgacgtcgacatcccgcgcgac
gccctcgtggcgttcacaggggtgtcgggctcgggcaagagctcgctcgccttcggtacc
ctctacgccgaggcgcagcgccgattcttcgagtcggtggcgccttacgcgcgacgcctc
atcgaccaggtcggcgcgcccgacgtcgacaggatcgacgggctcccacccgccgtcgcc
ctgccgcagcagcgcacgggcggcacggcccgctcgactgtcggcagcgccaccaccttg
gccaacgtcgtgcggatgttcttctcgcgcgtcggcacatacccgcccggcgccccgatg
ctgctggccgaggacttctcgacgaacaccgtccagggcgcctgcccgacctgccacggg
ctcggccgcgtctacgacgtgcccgaagagctcatggtgcctgacgacaccctctcgatc
cgcgacaaggccatcgtcgcgtggcccaccgcctggcacggcaagcagctccgcgacagc
ctggtctcgctcggctacgacatcgacatcccctggcgagacctgccccgcgatcagcgt
gactgggcgctctacaccgacgagtctccccaggtgccgatctatcgcgacctctcgccc
gcacaggtgcggaaggccgtcgctgccaaggccccgcactcctacatgggcaccttcctc
ggcgtgaagcggtacgtgctcgacaccttcgccgggtcgaaaagcgccaggatgcgagag
cgcgcggccgaattcatggtcagcgtcgtgtgccccacctgtgcaggccgacggttgaag
cccgacgccctggccgtcacggtggagggccacgacatcaccgaggtgtcggcgatgccg
ctgcacgacgtcgccgggctgatggagaaagtgctactgccggggtggggctctgaccgc
gcaaccgtcatcgcccccgagacgcgtctcgccgctcagcggctcgcggccgacctcctc
tcgcggctggcacccatcgtcgatctcggcctcggttacctctcgctcgaccgcaccacg
ccgaccctctcgtcgggcgagctgcagcggatgcgcctggcgacccaggtcttgtcgcga
ctgttcggcgtcgtcttcgtgctcgacgagccctcggcagggctccaccccgccgacacg
gagtctctgatccggatcctgcgcaccctcaaggagtcgggcaacacggtcttcttcgtc
gagcactcgctcgacgtcatcagagaggccgactggatcgtcgacatcgggcccggtgcc
ggatcgaccggcggcacagtggtctactcgggcccgctcgaggggctgcgcgaggcggag
gcgtcggtcacgcggcggtatctgttcggtgacctcgcgggggccagcactgcccgtgct
cggagacccggcgacgggcagctcgagctcgtcggcgtgacccgcaacaacctcgacgac
gtgtcggtcgccttcccgctgggggcgttcaccgccgtgaccggcgtctcggggtcgggc
aagtcgaccctcgtcacccacgcgatccccgacctgctgcgggcgagcctcgccagcgag
gtcgaccccgaggccgcctccgacgacgacgagccgacgacgtcggggcaggatccgctc
ttgtcggccgcacccgacgtcactgtcggccgcgcttcgggccccgagggccgtctccgc
cgcgtcgtgcaggtgagccagaagcccatcggccgaacgccccggtcgaacgtcgcgacc
tacaccggcctcttcgatcgcatccgggcccgcttcgccgccacccccgaggcgcgtcga
cgtcactacggcgccagccgcttctcgttcaatctgccggccgggcgctgccccgtctgc
aagggcgagggcacgatggaggtcgagctgctgttcctccccaccgtgcacgcggtctgc
agtgcctgccacggctcgcgctacaaccccgacaccctcgagatcctgctcgacggcagc
accatcgccgacgtcttagccctgagcgtcgaccgcgcggcggagttcttcgcctccgac
gaggaggtcgcccggcacctcgacgccctgctcgacgtcggcctcggctacgtctcgctc
ggccagtcggcgaccgagctctcgggcggcgaggcccagcgcgtcaagctggccaccgag
ctgcgtcgcggccagcgcggcgacaccctctacctcctcgacgagcccacctcgggcctc
cacccggccgactccgaccgcctgatcggccacctgcaggatctcgtcgacagcggcaac
accgtcatcatcgtcgagcacgacatgcgcgtcgtcgcccaagccgactgggtgatcgac
ctcgggcccggcgccggtgccgccggcgggcgggtgttggcgcaggggacgcccgaagag
gtcgcggcgcataagtcgagtgtgacggctccgttcttgcgcgccgcactcggtggcgac
ggccgcgcagagtggcgcactcgacaggcgaactga
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