Frondihabitans sp. PAMC 28766: AX769_06005
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Entry
AX769_06005 CDS
T04281
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
frp
Frondihabitans sp. PAMC 28766
Brite
KEGG Orthology (KO) [BR:
frp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
frp03032
]
AX769_06005
03400 DNA repair and recombination proteins [BR:
frp03400
]
AX769_06005
Enzymes [BR:
frp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AX769_06005
DNA replication proteins [BR:
frp03032
]
Prokaryotic type
DNA Topoisomerases
AX769_06005
DNA repair and recombination proteins [BR:
frp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AX769_06005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AMM19786
UniProt:
A0A126YYL2
LinkDB
All DBs
Position
1232611..1233585
Genome browser
AA seq
324 aa
AA seq
DB search
MPRLRHTDHTRPGVTRVKAGRGFTYRDVHGTTISDHELRARIEHLAIPPAWTDVWIAPYD
NGHIQATGVDAAGRRQYIYHPTWREQKDRIKFDRALALAESLPVARRFVTQDLRRDEPDR
ERALAAAFRMLDTGSLRVGSERYAEEHGSHGLATLLCSHATVSGDTVALDFPGKSGQEWG
STITDADLARVIRSLKRRGGRARLLAYRPEAGAAWRPLHSPEINAYVKERAGDEFTAKDF
RTLHGTVTAATSLARTGPQPTRTKRQRALAQAMRDASEVLGNTPSIAKSSYVDPRLVDAY
QAGETIDPARLGSAETEVRALLFR
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtctgcgacacaccgaccacacgagaccaggcgtgacccgggtgaaggccggg
cgcgggttcacgtaccgcgacgtgcacggcacgaccatctccgaccatgagttgcgtgcc
cgcatcgagcacctggccatcccgccggcctggaccgacgtgtggatcgccccatacgac
aacgggcacatccaggccaccggagtcgacgctgccggccgccgccaatacatctaccac
ccgacgtggcgcgagcagaaagaccgcatcaagttcgaccgtgccctcgccctcgccgag
tcgctgcccgtggcgcgacgcttcgtgacgcaggatctccgccgcgacgagcccgatcgc
gagcgagcgcttgcggccgcgttccgcatgctcgacacgggctcgctgcgggtcggctcc
gagcgctatgccgaagagcacggcagtcacggtctcgcgacgctgctctgcagccacgcg
accgtctcgggcgacaccgtcgcgctcgacttccccggcaagagcggccaggagtggggc
tcgacgattaccgacgccgacctcgcccgcgtgatccgctcgctcaagcgtcgtggcggt
cgggcgcgcctgctcgcctaccggcctgaagccggagccgcatggcgtcccctccactcg
cccgagatcaacgcctacgtgaaggagcgtgccggcgacgagttcacggcgaaagacttc
cgcaccctccacggcaccgtgaccgccgccacgagcctcgcgcggacgggcccgcagccg
actcgcaccaagcgacagagagcactcgcgcaggcgatgcgcgacgcgtccgaggtgctc
ggcaatactccttcgatcgccaagagcagctacgtcgacccgcgactcgtcgatgcctac
caggcgggcgagaccatcgatcctgcgcgactcgggtctgccgagaccgaggtgcgagca
ctcctgttccggtga
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