Frondihabitans sp. PAMC 28766: AX769_06350
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Entry
AX769_06350 CDS
T04281
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
frp
Frondihabitans sp. PAMC 28766
Pathway
frp03420
Nucleotide excision repair
frp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
frp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AX769_06350
03430 Mismatch repair
AX769_06350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
frp03400
]
AX769_06350
Enzymes [BR:
frp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AX769_06350
DNA repair and recombination proteins [BR:
frp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AX769_06350
MMR (mismatch excision repair)
Other MMR factors
AX769_06350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_12
AAA_30
AAA_22
PAC4
DEAD
Motif
Other DBs
NCBI-ProteinID:
AMM19846
LinkDB
All DBs
Position
1289822..1292296
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AA seq
824 aa
AA seq
DB search
MTIVLEPFDNSSDGAPSRAGGPGPGGAQNDRLTAGLNPQQKEAVEYRGQSLLIVAGAGSG
KTSVLTRRIAGLIDSREAWPSQILAITFTNKAAAEMRERVAALIGQSSEGMWISTFHSAC
VRILRREAEQFGFTKSFTIYDSADSRALLKRILKELDADSLGFTVSQAAGKISKLKNELS
DVESYSRQINMGDPQEVMFLEIFRQYTRELQRANAFDFDDLIAQTVYLFRAFPHVAAVYQ
RRFRHILVDEYQDTNHAQYSLIRELTRPVETDLVDDLERGGQFVQTLRDGSGRIPGASLT
VVGDSDQSIYAFRGADIRNITEFEHDFPHSKVILLEQNYRSTQNILDAANAVIANNFDRQ
AKNLFTTVGTGDKIVGFTGYTGHDEAQFVADEITALHESGTAYKDVAVFYRTNSQTRALE
EIFIRSAIPYRVLGGTKFYERAEIKDAMAYLIAVANPADPMALRRIMNTPKRGIGPATET
ALQRWADQNETTLRDAMRHASELGLGPKVTGAITGLAKLLDDVSATAATDPVHDILAALI
EGSGLVTALRASRDPQDEARAENIDELVAVTREFQKNNPDGVLLDFLTEVTLVAAADDLD
DTSGTVSLMTLHTAKGLEYDAVFLTGVEEDLLPHRMSASEPGGPSEERRLFYVGITRAKK
RLFLSLAMTRAQFGEVNVAMPSRYLQEIPAELIDWKQSPGMANSRGGTQPRALNARRDGG
IGGDSGGFGGRPRAASGYGSGSYDRATAASKTKPKTEWANRVTGTVRDNGDLELDAGDRI
SHVDFGEGRVVAVTGVGPRRIAEVQFDTAGRKKLLIKVAPIEKI
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgttctcgagcccttcgacaactcctccgacggcgcgccctcgcgggccggc
gggcccgggcccggcggggctcagaacgaccggctgacggcgggcctcaacccccagcag
aaagaggcggtcgaataccgcgggcaatcgctgctgatcgtcgcgggtgcgggctcgggc
aagaccagcgtgctgacgcggcgcatcgcgggcctcatcgactcgcgcgaggcgtggccg
agccagatcctcgccatcaccttcaccaacaaggcggcggccgagatgcgagagcgcgtg
gcggcgctgatcgggcagtcgtcggagggcatgtggatctcgacgttccactcggcctgc
gttcgcatcctgcgccgtgaggccgagcagttcggcttcaccaagagcttcacgatctac
gactccgccgattcgcgcgccctgctcaagcgcatcctgaaagagctcgacgccgactcc
ctcggcttcaccgtcagccaggccgccggcaagatctccaagctcaagaacgagctgagc
gatgtcgagtcgtactcgcgccagatcaacatgggcgacccgcaagaggtcatgttcctc
gagatcttccgtcaatacacgcgtgagctacagcgtgccaacgccttcgacttcgacgac
ctcatcgcgcagaccgtctacctcttcagagccttcccgcacgtggcggccgtctaccag
cgccgcttccgtcacatcctggtcgacgaataccaagacaccaaccacgcgcagtactcc
ctcattcgcgagctgacccggcctgtcgaaaccgatctggtcgacgacctcgagcgcggc
gggcagttcgtgcagactctccgcgatggcagcggcaggatcccgggcgcctcgctcacc
gtcgtcggcgactccgaccagtcgatctacgccttccgcggggcggacatccgcaacatc
accgagttcgagcacgacttcccgcactcgaaggtgatcctgctcgagcagaactaccgt
tcgacccagaacatcctcgacgccgcgaacgccgtcatcgccaacaacttcgaccgccag
gccaagaacctctttacgacggtcggaacgggtgacaagatcgtcggcttcaccgggtac
accggccacgacgaggcgcagttcgtggccgacgagatcaccgccctgcacgagtcgggc
acggcctacaaagacgtggccgtcttctatcgcaccaactcgcagacgcgagccctggaa
gagatcttcatccggtcggcgatcccctaccgggtgctgggcggcaccaagttctacgag
cgggcagagatcaaggatgcgatggcgtatctcatcgccgtcgcgaacccggccgacccg
atggctctccgccgcatcatgaacactcccaagcgcggcatcgggcccgcgaccgagacg
gcgctgcagcgctgggccgaccagaacgagacgaccttgcgcgacgccatgcgccacgcg
tccgagctgggactcgggccgaaggtcacgggcgccatcacgggccttgcgaagctcctc
gacgacgtgtcggcgaccgcggcgaccgacccggtgcacgacatcctcgccgcgttgatc
gagggcagcggtctcgtgaccgctctgcgggcctcgcgcgacccgcaggacgaggcgcgg
gccgagaacatcgacgagctggttgccgtcacgcgcgagttccagaagaacaaccctgac
ggcgtcctgctcgacttcctcaccgaggtcactctcgtcgccgctgccgacgatctcgac
gacacgagcggcacggtgtcgctgatgaccctgcacaccgcgaagggcctcgaatacgac
gccgtcttcctgaccggggtcgaagaagacctgctgccgcaccgcatgtcggcctccgag
ccgggcggcccgtccgaagagcgacggctgttctacgtcggcatcacgcgggccaagaag
aggctcttcctgtcgctcgcgatgacgagggcccagttcggcgaggtgaacgtcgccatg
ccgtcgcgctacctgcaagagatccctgccgagctgatcgactggaagcagtctcctggc
atggcgaacagccgcggtggcacccagccccgggccctcaatgcgcgccgagacggcggc
atcgggggcgactccggtgggttcggaggtcgcccccgcgccgcctccggctacgggtcg
ggcagctacgaccgcgccaccgctgcgtcgaagaccaagccgaagaccgagtgggcgaat
cgagtcaccggcaccgttcgtgacaatggcgatctcgagctcgacgcgggcgaccgcatc
tcgcatgtcgacttcggcgaggggcgtgtggtcgcggtgaccggtgtcgggccgcgacgg
atcgccgaggtgcagttcgacacggccgggcgcaagaagctgctcatcaaggttgctccg
atcgagaagatctga
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