Frondihabitans sp. PAMC 28766: AX769_09190
Help
Entry
AX769_09190 CDS
T04281
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
frp
Frondihabitans sp. PAMC 28766
Pathway
frp03420
Nucleotide excision repair
frp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
frp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AX769_09190
03430 Mismatch repair
AX769_09190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
frp03400
]
AX769_09190
Enzymes [BR:
frp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AX769_09190
DNA repair and recombination proteins [BR:
frp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AX769_09190
MMR (mismatch excision repair)
Other MMR factors
AX769_09190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
DEAD
DUF7552
Motif
Other DBs
NCBI-ProteinID:
AMM20305
LinkDB
All DBs
Position
1884476..1887721
Genome browser
AA seq
1081 aa
AA seq
DB search
MLPHPRRGGGDAVRTALEIADRLGLPRPTDEQQRVIEAPLEPALVVAGAGSGKTETMASR
VVWLLANGLVTVPQVLGLTFTRKAAGELAERIRGRIERLAEAELLEGGVDPFDAPTVSTY
NAFANTIFRDNALLVGRESESQVLSEASAWQLARSLVVSSDDSRLATLGRSVDSLTETVV
ALSHALGENVAEAPAVSRMADRFVDLASLPSSKGSSYKTLTDATEALAGLPPMLDLAELF
AAEKARRGFVEFSDQVALALQVCETSPGVVDEHRERFRVILLDEYQDTSVVQTRLLARLF
RGTGVMAVGDPHQSIYGFRGASAANLGRFPLDFGDGAAATFTLSTSWRNPTSVLDAANVV
VDELSRASAVPVGRLTARPDAGAGSVEALYAETVDDEADGVARWFRQRLRPGQGDDELPT
AALLFRSKATMPVFVEALKRHGVKHHVLGVSGLLQRPEIVDLVSCLRVLHDPAAGSELIR
LMAGARWRIGIHDIAVLRQVSSWLFTHDHAQQRLEQDVADRLRASVAPGEHGSIVDALDF
VGTAPPAHHQLAGFSAEGLDRLRALARQLAFLRNRTGLDLVDLVALVQQEMLLDIEVAAA
AGSLRGNAYLQAFDDELAGYVATDDTASLAGFLSWLSAAERRDDMGPRSDESEKGTVQLL
TVHGSKGLEWDLVAVPRLVEGELPGTSREGKGWLTFGKLPFEFRGDANELPVFGWRDFDD
QKEFHDALAVFEDELRERHLAEERRLAYVALTRAKRELLLTGSFWATQTRPRGASRYLTE
LVSAGILPPEALPEAPENDDNPLTASHESPLWPFDPLGARREAVEGAAAQVRLAIERGDA
SGGRWARDIELLVRERAASREPETTTLPQRIPASRFKDYVDDPAAVAASLRRPLPERPYR
ATRLGTLFHAWVEERFRPTGRGEVLDAESFDLEGDDERDPFGVVPGAPVDPDDARRLAEL
QATFERSEWAALEAVDVELEIHLPLGARTVICKIDAVFERDGRYQVVDWKTGKAPSGADD
LALKQLQLALYREAYAQYRGLDPALIDAVFYFVADDALLRPESVSDRAELERLWGTVEDR
L
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atcctgccgcatccacgtcgtgggggaggtgacgcagtgaggaccgccctggagatcgcc
gaccggctcgggctgccgcgccccaccgacgaacagcagcgcgtcatcgaggcgccgctc
gagcccgcgctcgtcgtcgccggcgccggcagcggaaagaccgagacgatggcgagccga
gtcgtgtggctcttggccaacgggctcgtgacggtgccgcaggtgctcggcctcactttc
acccgcaaggccgccggcgagctcgccgagcgcatccggggtcgcatcgaacggctcgcc
gaggccgagctgctcgagggcggtgtcgacccgttcgacgcgcccaccgtgtcgacctac
aacgccttcgcgaacacgatcttccgtgacaacgccctcctggtcgggcgcgagagcgag
tcgcaggtgctcagcgaggcgtccgcctggcagctggcccgctcgctggtcgtgtcgagc
gacgactcgcggctggcgactctcggccgctcggtcgactcgctcaccgagacggtcgtc
gcgctcagtcacgcgctgggcgagaacgtcgccgaggcgcccgcagtctcgcgcatggcc
gacagattcgtcgacctcgcttcactgccgtcatcgaagggctcgtcgtacaagacgctc
accgacgcgaccgaggcgctggccgggctgcccccgatgctcgacctcgccgagctcttc
gctgccgagaaggcgcggcgcgggttcgtcgagttctccgaccaggtcgccctcgcgctg
caggtgtgcgagacgtcgcccggtgtcgtcgacgagcaccgcgagagattccgggtgatc
ctgttggacgaataccaggacacctcggtggttcagacgcgcctgctcgcgcggctcttc
cgtggcacgggcgtgatggccgtcggcgacccgcaccagtcgatctacggattccgcggg
gcgagcgcggcgaacctcggccgattcccgctcgacttcggcgacggcgccgccgccacc
ttcaccctgtcgacgagctggcgcaacccgacgagcgtgctcgacgcggccaacgtggtc
gtcgacgagctgtcgcgagcctcggccgtgccggtggggcggctgactgcgcggcccgac
gcaggtgccgggtcggtcgaggcgctgtacgccgagacggtcgacgacgaggccgacggt
gtcgcccggtggttccgccagaggcttcgcccggggcagggcgacgacgaactccccacg
gcggcgctcctcttccgctcgaaagcgacgatgccggtcttcgtcgaggccctgaagcgc
catggcgtgaagcaccacgtgctcggcgtcagcgggctcctgcagcggcccgagatcgtc
gacctcgtcagctgcctgcgggtgctgcacgaccccgcagccggctccgagctgatccgt
ctgatggcgggggcccgctggcgcatcggaatccacgacatcgcggtgcttcggcaggtc
tcgtcgtggctcttcacccacgaccacgcgcagcagcgcctcgagcaggatgtcgccgat
cgcctccgcgcatcggtcgccccgggcgagcacggctcgatcgtcgacgccctcgatttc
gtcggcacggcgccgcccgcccaccaccagctggcaggattcagcgccgagggtctcgat
cgcctccgcgcgctcgcccgtcagctcgcgttcctccgcaatcgcaccggtctcgacttg
gtcgacctggtcgcgctcgtgcagcaggagatgctgctcgacatcgaggtggccgcggcc
gcgggcagtctgcgcggcaacgcgtacctccaggcgttcgacgacgagctcgcgggctac
gtcgccaccgacgacaccgcgagcctcgccggttttctgtcgtggctgtcggccgccgag
cggcgcgacgacatgggcccccgctcggacgagagcgagaagggcaccgtgcagctgctg
acggtgcacggctcgaagggcctcgagtgggatctcgtggcggtgccgcggctcgtcgag
ggcgagctgcccggcacctcgcgcgagggcaagggctggctgaccttcggcaagctgccc
ttcgagttccgcggcgacgcgaacgagctgccggtgttcggctggcgcgacttcgacgac
cagaaggagttccacgacgccctcgccgtcttcgaagacgagctgcgcgagcggcacctg
gccgaagagcgtcggctcgcctacgtcgcgctgacgcgggcgaaaagggagctgctgctg
acgggatcgttctgggcgacgcagacgaggccgcgaggggcgagtcggtacctgaccgag
ctggtgagcgccggcatcctgcccccggaggccctgcccgaagcacccgagaacgacgac
aaccccctgacggcgtcgcacgagtcaccgctctggccgttcgacccgctcggggcgcga
cgggaggccgtcgagggcgcggccgcgcaggtgcgcctcgcgatcgagcgaggcgacgcg
tcagggggccggtgggcgcgcgacatcgagctgctggtgcgcgagcgggcggcgtcccgt
gagcccgagacgaccacgctgccgcagcggatccccgcgtcgcgcttcaaagactatgtc
gacgaccctgccgcggtcgcggcgtctctccggcggccgctgcccgagcggccctaccgc
gcgacccgcctcggcacgctcttccacgcctgggtcgaagagcgcttccgccccacgggc
cgcggcgaggtgctcgacgccgagagcttcgacctcgaaggcgacgacgagcgcgaccct
ttcggcgtggtgcccggcgccccggtcgaccccgacgacgcgcgccgattggccgagctg
caggcgaccttcgagcgctcggagtgggcggccctcgaagcggtcgatgtcgagctcgag
atccacctgccgctgggtgctcgcaccgtcatctgcaagatcgacgcggtgttcgagcgc
gacgggcgctaccaggtggtcgactggaagacgggcaaggcgccgagcggtgccgacgat
ctggccctcaagcagctgcagctggcgctctatcgcgaggcgtacgcgcagtatcggggt
ctcgatccggcgctcatcgacgcggtgttctatttcgtggccgacgacgctctgctgcgg
cccgaatcagtcagcgaccgggccgagctcgagcggttgtgggggacggtcgaagaccgg
ttgtga
DBGET
integrated database retrieval system
