Frondihabitans sp. PAMC 28766: AX769_13365
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Entry
AX769_13365 CDS
T04281
Name
(GenBank) DNA topoisomerase IV
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
frp
Frondihabitans sp. PAMC 28766
Brite
KEGG Orthology (KO) [BR:
frp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
frp03032
]
AX769_13365
03400 DNA repair and recombination proteins [BR:
frp03400
]
AX769_13365
Enzymes [BR:
frp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AX769_13365
DNA replication proteins [BR:
frp03032
]
Prokaryotic type
DNA Topoisomerases
AX769_13365
DNA repair and recombination proteins [BR:
frp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AX769_13365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
Inp1
DUF6026
Motif
Other DBs
NCBI-ProteinID:
AMM20940
LinkDB
All DBs
Position
2776466..2778928
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AA seq
820 aa
AA seq
DB search
MTTTDTTGASGGFDGERIEEIDVSAEMQGSFLEYAYSVIYSRALPDARDGLKPVQRRILY
QMSEMGLRPDRGHVKSARVTGEVMGKLHPHGDSAIYDALVRLAQDFTMRLPTIDGHGNFG
SLDDPPAAARYTEVRLAPSALAMVEGIGEDVVDFVPNYDNQLMQPEVLPSAFPNLLVNGG
SGIAVGMATNMAPHNLVEVIGAARHLIDHPHASLDDLMAFVPGPDLPTGGTIAGLAGVRD
AYATGRGSFKVRARVSIENLTARKKGLVFTELPYMIGPEKVIERVKDGVGNKKLTGISDI
NDYSDRHHGLRLVVEIKTGFSPEAVLEQLYRHTPLEDGFSINNVALVDGQPRTLGLKELL
EVYVAHRLEVVTRRSRYRLQKREDRLHLVEGLLIAIVDIDEVIQVIRTSDDSDAAKGRLR
QIFDLSDLQAEYILELRLRRLTRFSRIELETERDELNAQIAELRELLADQSKLRALVSTE
LEDIAETYGTPRRTLLTEAAPSVASASKRSAPLLEVADVPTRVYLSTTGRILRVDLVDGA
GDGPVPPSRRTKHDAIRSSLTTTSRAEIGAVTSTGRLIRFTPVDIPASPPTSVQLGAGVK
IGDYLGVLEKNEQVLALVSLDSDLPLALGTAQGIVKRVTPGAWPSKPDFPVISLKPGDAV
IGVAQGGDEDELVFVTSTTQLLHYSASLVRPQGPAGGGVAGVSLAAGATAIFFGAVATGS
DAVVATISTSSATIAGADPGRVKVSAFADYPGKGRATGGVRAHALLKGEDALSIAWVGVA
PPLAVAADGGVRQLPATLARRDASGTPLDTVVGSIGGAVS
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgaccgacaccacaggcgcctccggcgggttcgacggcgaacgcatcgaagag
atcgatgtctcggccgagatgcaggggtcctttctcgagtacgcctattcggtcatctat
tcgcgcgcccttcccgacgctcgtgacgggctgaagccggtccagcgtcgcatcctgtac
cagatgtcggagatgggcctccgccctgaccgtgggcacgtgaagagtgcccgtgtcacc
ggcgaggtgatgggcaagctccatccgcacggcgacagtgccatctacgacgccctggtg
cgcctggcgcaggacttcacgatgcggctgcccacgatcgacgggcacggcaacttcggg
tctctcgacgacccgccggctgccgcccgctacaccgaggtgcgcctcgccccgtcggcc
ctggcgatggtcgagggaatcggcgaagacgtcgtcgacttcgtgccgaactacgacaac
cagctgatgcagccggaggtgctgccgagcgccttccccaacctgctggtcaacggcggt
tcgggcatcgcggtcgggatggcgaccaacatggcgccgcacaacctcgtcgaggtcatc
ggcgcggcccgtcacctcatcgaccacccccacgcatcgctcgacgacctgatggccttc
gtgcccgggcccgatttgccgaccggaggcaccatcgcgggcctcgccggcgtgcgcgac
gcgtacgcgaccggccgcggcagcttcaaggtgcgcgcccgcgtctcgatcgaaaatctg
acggcccgcaagaagggcctggtcttcaccgaactgccatacatgatcggccccgagaaa
gtcatcgagcgggtcaaagacggtgtgggcaacaagaagctcaccggcatctccgacatc
aacgactacagtgaccggcaccacggcctgcgtctcgtcgtcgagatcaagaccgggttc
agccccgaggccgtgctcgagcagctctaccggcacaccccgctcgaagacggcttcagt
atcaacaacgtcgcgctcgtcgacggtcagccgcgcaccctcggcttgaaagagttgctc
gaggtctacgtcgcgcaccgcctcgaggtcgtcacgcgccgcagccgttaccgcctgcag
aagcgcgaagatcgcctgcacctcgtggagggtctcctgatcgccatcgtcgacatcgac
gaggtcatccaggtgatccgcaccagcgacgactccgatgcagccaagggtcgcctgcgc
cagatcttcgacctctccgacctccaggccgagtacatcctcgagctgcgactgcgccgc
ctcacccgcttcagccgcatcgagctcgagaccgagcgcgacgagttgaacgcgcagatc
gccgagctgcgcgagctgctcgccgaccagagcaagctgcgcgccctcgtgtcgaccgag
ctcgaagacatcgccgagacctacggcacgccccgccgtaccctgctgaccgaggcggcg
ccgtcggtggcctccgcgtcgaagcgctcggcccccctgctcgaggtcgccgatgtgccg
acgcgggtgtacctgtcgacgaccggtcggatcctgcgggtcgacctggtcgacggggcc
ggcgacgggccggtgccgccgtcgcgacggacgaagcacgatgcgatccggtcgtcgctg
accaccacgtcgcgagccgagatcggcgccgtcacgagcacgggccgcctcatccggttc
acacccgtcgacataccggcttctcccccgacgtcggtgcagctcggcgcgggcgtgaag
atcggcgactatctgggcgttctcgagaagaacgagcaggtgctggcactggtgtcgctc
gactccgacctgccactcgccctcggcacggcgcagggcatcgtcaagcgcgtcacgccc
ggcgcgtggccgtcgaagcccgacttcccggtgatctcgcttaaacccggcgacgcggtg
atcggcgtcgcccagggtggcgacgaggacgagctggtgttcgtcacgtcgaccacgcag
ctgctgcactactcggcgtcgctcgtgcggccgcaggggccggccggcggcggtgtcgcg
ggcgtctcgctcgcggccggggcgacggcgatcttcttcggggccgtggcgacggggtcg
gacgccgtcgtcgcgaccatctcgacgtcgtctgcgaccatcgccggtgctgatcctggt
cgcgtgaaggtgtcggcgttcgccgactacccgggcaaggggcgtgccaccggcggtgtc
cgggcacacgcgctgctcaagggcgaagacgcgctctcgatcgcgtgggtcggcgtcgcg
ccgcccctcgccgtcgcagccgacggcggagtgcgccagctgcccgcgacgctcgcccgc
cgtgacgcgtcgggcacgccgctcgacaccgtggtcggttcgatcggtggcgctgtctcc
tag
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