Frondihabitans sp. PAMC 28766: AX769_19305
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Entry
AX769_19305 CDS
T04281
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
frp
Frondihabitans sp. PAMC 28766
Brite
KEGG Orthology (KO) [BR:
frp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
frp03400
]
AX769_19305
Enzymes [BR:
frp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AX769_19305
DNA repair and recombination proteins [BR:
frp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AX769_19305
Prokaryotic type
AX769_19305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
UPF0270
DUF7059
Phage_TTP_15
Motif
Other DBs
NCBI-ProteinID:
AMM21898
LinkDB
All DBs
Position
4041029..4042402
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AA seq
457 aa
AA seq
DB search
MTSPSLVWLRDDLRLGDNPALHAALERDEPVVVLYVLEDDSDGLRPLGAASKWWLHQSLT
ALDADLRERGGSLTLRHGSSKKVVPTLARELGAGAVFWNRRYGRAARDLDTEIKSTLHDA
GFDAHSFQGSLLFEPWTIQTGSGTPFKVFTPFYRACLDQQEPRHPHPKPRHVPGPRSAPD
SDDLASWGLEPAKPDWAGGLRDRWEPGEAAAHRVLEEFVHSDLADYGDRDLPADDTTSHL
SPYLRWGEISPFQVWHRLRGDLPPAAKKLTAAFRRQLVWREFNYTVLFANPDLATANYRP
EFDDFPWAKPHVRDLEAWQQGRTGIPLVDAGMRELWQTGVMHNRVRMVVGSFLIKNLLID
WRVGEQWFWDTLVDADEANNPGNWQWVAGSGADATPYFRVFNPLLQADKFDKQREYVTQW
VAEVDTEDYPEPIVDLKQSRQEALAAYDTMRTKAGLK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtcaccctccctcgtctggctgcgcgacgacctgcggctcggcgacaatccggcc
ctccacgccgccctcgagcgcgacgagcccgtcgtggtcctgtatgtgctcgaagacgac
agcgacggcctccgcccgcttggcgccgcgagcaagtggtggttgcaccagtcgctcacc
gcgctcgacgccgacctccgcgagcgcggcggcagtctgacgttgcggcacggctcgtcg
aagaaagtcgtccccacgcttgctcgcgagctgggggcgggtgcggtcttctggaaccgc
cgctacggcagagccgcccgcgacctcgacaccgagatcaagtcgaccctccacgacgca
ggattcgacgcgcacagcttccagggcagcctcctgttcgagccgtggacgatccagacc
ggcagcggcacgcccttcaaggtgttcacgccgttctaccgggcgtgcctcgaccagcag
gagccgcggcacccccacccgaagccccgccacgtgcccggcccgcggtcggcgccggac
agcgacgacctggcatcctggggcctcgaaccagcgaagccggactgggccgggggcctt
cgcgaccggtgggagccgggcgaggcggcggcgcaccgcgtgctcgaggagttcgtgcac
tccgacctcgccgactacggcgaccgcgacttacccgccgatgacacgacgagccatctc
tcgccgtacctgcgctggggcgagatcagccccttccaggtctggcaccggctgcgcgga
gacctgccacccgcggcgaagaagctgacggcggccttccggcggcagctggtctggcgc
gagttcaactacacggtgctgttcgcgaaccccgacctcgccaccgccaactaccggccc
gagttcgacgactttccgtgggcgaagccgcacgtgcgcgacctcgaggcctggcagcag
gggcgcaccggaatcccactggtcgacgccggcatgcgcgagctctggcagaccggggtg
atgcacaatcgggtgcgcatggtcgtcggaagctttctgatcaagaacctgctgatcgac
tggcgcgtcggcgagcagtggttctgggacaccctggtcgacgccgacgaggccaacaac
ccgggcaactggcagtgggtcgccgggtcgggcgccgacgccaccccctacttccgtgtc
ttcaacccgctgctgcaggccgacaagttcgacaagcagcgcgagtacgtgacgcagtgg
gtcgccgaggtcgacaccgaggactaccccgagccgatcgtcgatctgaagcagagccgc
caggaggcgctggcggcgtacgacacgatgcggacgaaggcgggcctgaaatga
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