Fervidobacterium riparium: IB67_03300
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Entry
IB67_03300 CDS
T08552
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
frr
Fervidobacterium riparium
Brite
KEGG Orthology (KO) [BR:
frr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
frr03009
]
IB67_03300
Enzymes [BR:
frr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
IB67_03300
Ribosome biogenesis [BR:
frr03009
]
Prokaryotic type
ribosomal protein modification factors
IB67_03300
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
TRAM
Motif
Other DBs
NCBI-ProteinID:
UXF00614
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All DBs
Position
737366..738649
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AA seq
427 aa
AA seq
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MKLYIVVLGCPKNEADFSLFKHHIKQLGHEIVDDLEEADGVVVDTCGFIVDAKQESIDTI
LEFVEHKKVKKDFKVFVTGCLVQRYPKDLPHEIPEVDGWFGVIPPKVLAENIQKVSKYIT
DPIAVYDFEGRVDDDLPYAYVKIADGCDRACTFCTIPKFKGGFVSRKLEDIENEVRTLVS
SGKREVILVAQDTTGYGIDIYGKQMLPELLKRLNKIDGDFWIRVMYMHPDHVTDEILEGF
SYEKVVKYFDIPVQHGSTKILKLMNRTRTPSELEKLFEKIRTMYPDAVLRTSIILGFPGE
TSEDFEELLDFVRAVEFDKLGAFIYSDEEDAASYKLPHKVRSSTAQKRLDRLMETQAEIS
AMRNQRFIERVIDVLVDEEANGVLIGRGYMDAPEIDGNVFVKGSGIKGFVKVRITEADTY
DLEGEIV
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
ttgaagttgtatattgttgttctcggatgtcctaaaaacgaggctgatttttctttattt
aagcatcacataaaacagcttggtcatgaaattgttgatgatttagaagaggcagatgga
gttgtcgtagatacttgtggatttattgtagatgcaaaacaagagtcaattgacactatt
ttagagtttgttgaacataagaaggtaaagaaagattttaaagtttttgtgactggctgt
ttagtgcagcgttatccaaaggacttaccgcatgaaattccagaggttgatggttggttt
ggtgtaataccaccgaaagtacttgcagagaatattcaaaaggtgagcaagtatatcacg
gatcctattgccgtgtacgatttcgaaggtagagtcgacgatgatttaccatacgcatac
gtgaaaattgccgatggttgcgacagagcttgtactttctgtacgataccgaaatttaaa
ggggggtttgtaagtagaaagcttgaagatattgaaaatgaggtcagaacattagtttca
tccgggaagagagaagttattttggttgctcaagataccacaggatatggtatagatatt
tacggcaaacagatgttaccagaactcttgaaaaggttaaataaaattgatggagatttt
tggattagagttatgtacatgcatcctgatcatgtgacagatgaaatcttggaaggtttc
tcgtacgaaaaggtggtaaaatattttgacattccagtccagcatgggagcaccaaaatt
ttgaaactgatgaacagaacgagaacaccgagtgagctcgaaaagctttttgaaaagatc
agaactatgtatccagacgctgttttgaggacttctatcattctcggatttcctggtgag
acttccgaagatttcgaagagttgctcgattttgttagagccgttgaattcgacaaactc
ggagcgttcatatattcagatgaagaagacgctgcatcttacaaattaccccacaaagta
aggtcatcaacagctcaaaagaggcttgacaggttgatggagacacaagcagagatttcc
gcaatgcgaaatcagagatttatcgaacgtgttattgatgtattggttgatgaagaggcg
aatggggttttgattgggcgtggttatatggacgcacctgaaattgatggaaatgtcttt
gtgaaaggcagtggtattaaaggttttgtaaaagtccggattactgaagccgatacatat
gatctggaaggtgaaatagtttga
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