Fervidobacterium riparium: IB67_04010
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Entry
IB67_04010 CDS
T08552
Name
(GenBank) tRNA pseudouridine synthase ACD
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
frr
Fervidobacterium riparium
Brite
KEGG Orthology (KO) [BR:
frr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
frr03016
]
IB67_04010
Enzymes [BR:
frr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
IB67_04010
Transfer RNA biogenesis [BR:
frr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IB67_04010
Prokaryotic type
IB67_04010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
UXF00742
LinkDB
All DBs
Position
complement(875877..876617)
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AA seq
246 aa
AA seq
DB search
MKRVAIEFSYDGTDFFGYQRQNDVRTVQGELEKALERVFKTSIQTYAAGRTDTGVHASGQ
VASFDIPSERLSELDIRNAINANLPRDIYVKKAWFVHENFNPRYEAKKRIYHYFILNSKS
NDIFLRRYTWWFPYKLNVEAMREAATYLVGEHDFTAFSKRGEDDTNPIRTISALRILRLK
KDLILIRVEGISYLRGMVRSLVANLIKVGTNQWKPEHILEVLESKDRSKSAGLAPAHGLF
LYKVLF
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgttgcgatagaattttcgtacgatgggacagatttctttggctatcaaaga
caaaacgatgtgagaacagttcagggcgaattggaaaaggcactcgaacgtgttttcaag
acttcaattcaaacatatgcagccggtagaactgacacaggggtacatgcaagcggtcaa
gtagcatcgttcgatatcccttcagaaagacttagtgaactagatattagaaacgccatc
aatgcaaacttaccaagagatatctatgtgaagaaagcttggtttgtacatgagaatttt
aacccaaggtacgaagcgaaaaagaggatataccactatttcattttgaattccaaaagt
aacgacatatttttaagacgatatacttggtggtttccatataaattgaatgtagaggct
atgcgtgaagctgctacttacttagttggagagcatgattttacagcgttcagcaagagg
ggagaagatgatacaaatcctatccgaaccatcagtgctttgcgtatactacgtttaaaa
aaagatcttatactgataagagtcgaaggaatctcgtatttaagaggcatggttagaagt
ttagtggctaatttaataaaagtaggaacaaatcaatggaaaccagaacatattctggag
gtgttagaatcgaaagatcgatcaaaatccgctggattggcacctgcgcatggattgttc
ttatacaaagtgttattttag
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