Fervidobacterium riparium: IB67_04255
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Entry
IB67_04255 CDS
T08552
Name
(GenBank) DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
frr
Fervidobacterium riparium
Pathway
frr03030
DNA replication
frr03410
Base excision repair
frr03420
Nucleotide excision repair
frr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
frr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IB67_04255
03410 Base excision repair
IB67_04255
03420 Nucleotide excision repair
IB67_04255
03440 Homologous recombination
IB67_04255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
frr03032
]
IB67_04255
03400 DNA repair and recombination proteins [BR:
frr03400
]
IB67_04255
Enzymes [BR:
frr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IB67_04255
DNA replication proteins [BR:
frr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
IB67_04255
DNA repair and recombination proteins [BR:
frr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
IB67_04255
NER (nucleotide excision repair)
GGR (global genome repair) factors
IB67_04255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
RNase_H_2
HHH_5
HHH
DUF5040
DprA_N
Motif
Other DBs
NCBI-ProteinID:
UXF00789
LinkDB
All DBs
Position
complement(937510..940203)
Genome browser
AA seq
897 aa
AA seq
DB search
MAKVFLFDGTGLLYRAYFAIDQSLSTTTGLPTGALFGVARMLLKFLKENVSVGKDYCAFV
IDVKGGSTYRKELYQQYKAHRPETPEPLLKQIDFAEELVQSFGVKVLKYPGYEADDVIAT
FVKIFERNKDFLNIEEINIVTSDKDMLQLIKDNTYVWRIEKGVTDIKKYTDKEVYEKYGI
YPNQIADYLALVGDASDNIPGVPGIGEKTAARILQEFGSVENALNNLDKLPEKVRERIQS
SLEDFELSRKLVELNSNVEINIELKNLVFEGYKPEVLLETLKKFEFSSIIKELQLSSSLT
DKSQYNVVRNEKELEKLLSEIEKAKKISLDLETTSLDPHTGKIVGISIAIDEGIAYYIPL
SHIGGPNIQYEKAKHFLEIVLNLKNFGGHNIKFDIKFLKKMGVEFPYPSFDTMLEAYLLN
PNEKRFNLDDLALKLLGHKMISYEEVVQSSVPLFAGDFSYVPVEAAAKYSCEDADMSLRI
HNKLYPLIYSYELTELYEKIELPMVKVLAELELNGVYFDIGYLNNLSNEMDKKLSNLSQK
IFELAGEVFNLNSPKQVGYILFEKLNLPAVKSTSTGAYSTDVEVLENLAGDYEIAKLLLE
YRKIQKLKSTYVDAIPSMVNKYTGRVHASFNQTGTATGRLSSSDPNLQNLPGRTDEGKEI
RMAVRPQKEGWWLLGADYSQIELRVLAHISEDPELIRAFREDKDIHLESAKKIFNVSEEF
VTDSMRRVGKMINFAIVYGVSPYGLAKRLGMDVKETRKVIEAYLETYKNVQEYIATTKEF
ARKNGYVKTLFGRRREIPQINSKDQNIRAEGERIAINTPIQGTAADIMKIAMINIYERMK
KENLKSLMILQVHDELVFEVPEDEVEIMKEIVKFEMENAVKLRVPLTVDIYVDKYMI
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaggtatttctatttgacggtactggattgctttatagggcatactttgcaatt
gatcaatctttgtcaacaacaacagggctaccaactggtgccctctttggtgttgcaagg
atgcttttgaaatttctgaaggaaaatgtttcggtaggtaaggattactgcgcttttgtt
attgatgtcaaaggtggaagtacgtatagaaaggaactctatcagcagtacaaagcgcat
agaccagaaacacctgaacctttattaaaacaaattgattttgctgaagagttagttcaa
agttttggggtaaaagttctgaaatatccaggttacgaagcggatgatgtaatagctaca
tttgtaaaaatcttcgaaagaaacaaagattttctgaatatagaagaaataaacatagtt
actagcgataaagacatgctgcaacttattaaagataatacttacgtatggcgtatagaa
aaaggcgtaacggatattaagaaatacacagataaagaagtatacgaaaaatacggtatt
tatccaaatcagatagcagattatctcgcacttgttggagatgcctcagataacattccg
ggagttccgggaataggtgaaaagaccgctgcaaggattttgcaagaatttggtagtgtt
gaaaacgctctcaacaacctcgataagcttccagagaaagtaagagaacgcatacaaagc
agtcttgaagattttgaactgagcagaaaactggttgagctgaattcaaatgtagaaata
aatatagaactaaaaaatcttgtatttgagggatataaacctgaggtacttttggaaaca
ctcaaaaaatttgagttttccagtattattaaagaattacaactttcatcgagtttgacg
gacaagtctcaatacaatgtcgtgcgaaatgaaaaggaacttgaaaaactacttagtgaa
attgagaaagcaaaaaagatatctttagatttggaaaccacatctttagatccacatacg
ggaaagattgttggtatatcgatcgctatcgatgaaggcatcgcttattacatacctttg
tcgcatattggtggtccgaatatccagtatgagaaagccaaacacttccttgagatagtt
ttaaatttaaaaaactttggtgggcataatataaaattcgacatcaaattcctcaagaag
atgggcgtagagtttccttacccatcttttgacacgatgctcgaagcataccttctaaat
cccaacgagaaaagattcaatctcgatgacctcgctctcaagcttttagggcacaagatg
ataagctacgaggaagttgtccaatcttccgttccactctttgcaggtgacttttcttat
gtccccgttgaagcagctgcaaagtactcttgtgaagatgccgacatgtcattgagaata
cacaacaagctttacccgcttatctattcttacgaattaacagagttgtacgaaaagata
gaattaccgatggtaaaagttcttgcggaacttgaattgaacggcgtttacttcgatatt
ggttatctaaataacttgtcaaatgaaatggataagaagctctccaacctttctcaaaag
atatttgaattagctggtgaggtcttcaatctaaattcacctaagcaggttggatatata
ctattcgagaaactcaacctacctgctgtaaagtcaacaagcactggtgcttactcaaca
gatgtcgaagtacttgagaaccttgcaggtgattatgaaatagcgaagctactactcgag
tatcgaaaaatccagaaactcaagagtacatatgttgatgcgattccatccatggttaac
aagtacactggcagggtgcacgcatcattcaatcaaactggtacggcaacgggacggttg
agtagctcggatccaaatctccaaaacctgccgggaagaactgacgaaggtaaggaaata
aggatggcggtaaggccacaaaaagaaggctggtggctcttgggggccgattattcccaa
attgaattgcgcgtgcttgcacacataagcgaggatccggagttgataagagcgtttaga
gaagacaaagatatccacttagaaagtgcgaagaagattttcaatgttagtgaggaattc
gttacagacagtatgaggcgcgttgggaagatgatcaactttgccatagtgtacggcgta
tcaccttatggcttggcaaaaaggcttggaatggatgtaaaagagacaagaaaagtaata
gaggcatatctcgaaacatataagaacgtacaggaatatatagcaacgacaaaagaattt
gcgaggaagaacggatatgtaaaaactttatttggaagacgccgggagataccacagatc
aattcaaaggatcaaaatatccgggcagaaggtgaaagaatcgcgataaacacaccgata
caaggaacagcagcagatataatgaagatagcgatgattaatatatacgaaagaatgaaa
aaagaaaatttgaagagcttgatgatattacaagtacacgacgaacttgtttttgaagtt
cctgaagacgaggttgagataatgaaagaaattgtgaaatttgagatggaaaacgctgtt
aagctcagagtgcctctaaccgtggacatttacgtagataaatacatgatttag
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