Fervidobacterium riparium: IB67_04270
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Entry
IB67_04270 CDS
T08552
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
frr
Fervidobacterium riparium
Brite
KEGG Orthology (KO) [BR:
frr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
frr03400
]
IB67_04270
DNA repair and recombination proteins [BR:
frr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IB67_04270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
AAA
AAA_22
ChlI
nSTAND3
GvpD_P-loop
NB-ARC
SLFN-g3_helicase
RecA
AAA_16
AAA_24
AAA_14
NTPase_1
ATPase_2
ABC_tran
NPHP3_N
AAA_5
Lon_C
ATP-synt_ab
Rad51
RNA_helicase
KTI12
ResIII
NACHT
AAA_18
AAA_19
Bac_DnaA
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
UXF00792
LinkDB
All DBs
Position
complement(941480..942859)
Genome browser
AA seq
459 aa
AA seq
DB search
MAKGKTIYVCDKCGYESPKWFGKCPVCGEWNTAKEFQMKDVSLSSKSIRADSAGMFQAHP
RFFDIKSAIELTNEKRIKTNIPALDQLLNGGFVHGQVLLLGGEPGVGKSTLALQICNSIS
SVNDEKHVYYISGEESVSQIGNRAKRLNIKNNNILITSETQIEDVLNNIDVDKTKLIIVD
SIQTLSSADIDSPVGGVVQIKAVVEKVRIFSKKNGIPAILIAHVTKEGLIAGPKLVEHVV
DTVVYFEGERTTDYRILRVQKNRYGPSGEIAVFQMTQEGLSSLSEDKLLTYSDTAGNVFT
GVFEGSRPLNVQIQALVSRVKMASGRRISHGVDVRKVIIISAVLAKHLNLPLDFHDIYLN
VSGGLNITDPGCELAIAGAILSSFLDSYIGNTFMVGEIGLDGSVRAAVNVTKRIDNAKNL
RLDKIIIPENVKYTPKDSKMEVISIRNIKELFKVIAKSE
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggggaaaactatatacgtatgtgataagtgcggttacgaatctccaaagtgg
tttggtaagtgtccagtatgcggtgaatggaataccgctaaagaatttcagatgaaagat
gtttctcttagttcaaaatctatacgagcagatagtgcggggatgtttcaggctcatcct
cgcttttttgatataaagagtgcgatagaattaactaatgaaaaaagaatcaagacaaac
atacccgctttggatcaacttctaaacggcggttttgtacacgggcaggttcttttattg
ggtggagagcctggggttggaaagagtaccttggcactccagatttgcaattcaatatcc
tcagtcaatgatgaaaagcacgtgtactatatttcaggtgaagaaagtgtttcgcagata
ggaaacagagctaaacgcttgaatataaagaataataacatattaattacatcggaaaca
caaatagaagacgtgctaaataacatcgatgtggacaaaacaaaactcataattgttgat
tccatccagactttgagcagtgctgatattgactcaccagtaggtggagttgttcagatt
aaggccgtcgttgaaaaagtgaggatttttagcaagaagaacggaataccggcaattttg
atcgcacacgtgactaaagaaggtttgatcgctggtccaaaacttgttgagcatgttgtg
gatactgttgtttactttgaaggtgagaggacaaccgattataggatactcagagttcag
aaaaacagatacggtccaagcggcgagattgcagtcttccagatgacgcaagaaggtttg
agtagcctttccgaagacaagcttttaacgtattcagacaccgctggaaacgtgtttaca
ggagtttttgaaggcagtagacctttgaatgttcagattcaagcgttagtttcgagagtc
aaaatggcttcaggacggagaatttcccacggtgtagacgtgaggaaagtgattataata
tcagccgtgcttgctaagcacctgaacttgccgcttgacttccacgatatatatttgaat
gtctctggtggtttaaatattacagatccaggttgcgaattggctattgcaggtgcgatt
ctttcctctttcttagattcatatatcggaaatacattcatggttggagagataggactc
gatggcagtgttagagcggcagtgaacgttacaaaaaggatagataatgcaaaaaatctt
aggcttgataagattataattcctgagaacgttaaatacaccccaaaagattcgaaaatg
gaagttatatctataaggaacatcaaagaactctttaaagtgatagcgaaatcagaataa
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