Fervidobacterium riparium: IB67_06005
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Entry
IB67_06005 CDS
T08552
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
frr
Fervidobacterium riparium
Pathway
frr00300
Lysine biosynthesis
frr00470
D-Amino acid metabolism
frr01100
Metabolic pathways
frr01110
Biosynthesis of secondary metabolites
frr01120
Microbial metabolism in diverse environments
frr01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
frr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IB67_06005
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IB67_06005
Enzymes [BR:
frr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
IB67_06005
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF6953
Motif
Other DBs
NCBI-ProteinID:
UXF01102
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All DBs
Position
complement(1293527..1294711)
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AA seq
394 aa
AA seq
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MELLERTEIKELISKIGKTYGTPLYVYFEEVIRKRARLVKSVFEGVNLLPTFACKSNNNP
NLIRILYEEGFGTDIVTVGEYYASKKAGIPDEMIVWNGNGKSREDMNVLSNIRYVNIDSF
EEYEQWMAFKRQYESVPEFFLRVNPNVDAKTHPHISTGLKKNKFGINIDDVSRILEKPNH
NIVGLHTHIGSQITSIEPFEEAISQVVELSKRYNLRKINIGGGWGINYNGSELDIFEYKK
RLIPLLKDFEKVIMEIGRYIIAPAGILLLQVEYVKRTQEKTFVVVNGGMNALIRPTLYDA
FHKIMVLNPTNEKNVVDIVGPLCESGDVIAVQREIEIPEVGSLLLVENAGAYGYSMSSNY
NSTLKPAEVLITSNGEAKLIRRRETYDDLFRTIV
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggaactattagaaagaacagaaataaaggaactgattagcaaaattggaaaaacgtat
ggaaccccactttacgtgtattttgaagaagtgattaggaagagagcaagactggtaaag
agtgttttcgagggtgtaaatctcttgccgacttttgcatgcaagtcaaacaacaatccg
aatttgatcagaatactgtatgaagaaggattcggaactgatatagtaaccgtcggtgaa
tattatgcttcgaaaaaggctggtataccagatgaaatgatcgtttggaacgggaacgga
aagtcaagagaggatatgaacgtgctttctaacattcgatatgttaatatagactcgttc
gaagaatacgaacagtggatggcgttcaaaaggcaatacgaaagtgtaccggagtttttc
ttgagagtgaatccaaacgttgatgcgaaaacgcatcctcatatctcaactggtctgaaa
aagaataaatttggaataaatatcgatgatgtgagcagaattctcgaaaaaccaaaccac
aacatcgtaggtctgcacacacatatcggctcacagataacatcaatagaaccatttgaa
gaggcaatctcccaagtggttgaactttcaaaaaggtacaatttgcgcaagataaacatt
ggtggtggatggggaattaattacaatggctctgaattagatatttttgaatacaaaaag
agacttatcccacttctaaaggattttgagaaagtgataatggaaattggaagatacatt
atcgcacccgctggtattcttctgcttcaagtagagtatgtgaagagaacacaagaaaag
acatttgttgtcgtaaacggcggtatgaatgcgttgattagaccaacactctatgatgca
ttccataaaatcatggttttaaatccgactaacgagaaaaatgtagtagacatcgtggga
ccgctttgtgagtcaggagatgtcatagctgtgcaaagggaaatagaaataccagaagtt
ggaagtttactgttagtagaaaatgctggagcgtatggttactcgatgtcaagtaactat
aactcaactttgaaacccgcagaggtactgatcacttcaaatggtgaagcaaagctcata
agaagaagagagacgtatgatgacctattcaggacaatcgtatag
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