Fervidobacterium riparium: IB67_06175
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Entry
IB67_06175 CDS
T08552
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
frr
Fervidobacterium riparium
Pathway
frr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
frr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IB67_06175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
frr03400
]
IB67_06175
Enzymes [BR:
frr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
IB67_06175
DNA repair and recombination proteins [BR:
frr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IB67_06175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UXF01135
LinkDB
All DBs
Position
1331284..1331874
Genome browser
AA seq
196 aa
AA seq
DB search
MKKEDLMKDIENRVHECQSCPLGFIRTNAVPGEGNVHSPIMFVGEGPGEEEDNQGRPFVG
RAGQLLTKILESVNIRREEVYITNVVKCRPPNNRVPTALEIQACSHFLIAQIEVINPRMI
IPLGSTAATFFLGKEESITKIRGKEIMWKGGIIVFPMFHPSYLLRNPSKEKGSPKDLTWQ
DIKKVRSYYESFLKAK
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaagaagacttaatgaaggatatagaaaatagggtacatgaatgtcaaagctgt
cctctcggttttataagaaccaatgccgtacctggtgagggtaacgtacattcaccaatc
atgtttgttggtgaaggtccgggggaagaagaagacaaccaaggaagaccttttgtcggg
cgtgctggtcaacttctgactaagatactcgaatcggttaatataagacgtgaagaagta
tatataactaacgttgttaagtgtcgtcctccgaacaacagagttccaactgctttggaa
atacaagcttgttcacacttcttaattgcacaaatcgaggttattaatccaaggatgata
attccgcttgggagtaccgctgcaactttctttcttggaaaggaagagtcgataacgaag
ataagaggcaaagaaattatgtggaaaggcgggattattgtttttccaatgttccatccg
agttacttgctgaggaatccgtcgaaagaaaagggaagtccaaaggaccttacttggcaa
gatataaagaaagttaggagctattatgaaagtttcttaaaggcaaaataa
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