Fervidobacterium riparium: IB67_06305
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Entry
IB67_06305 CDS
T08552
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
frr
Fervidobacterium riparium
Pathway
frr02024
Quorum sensing
frr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
frr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IB67_06305
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IB67_06305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
frr03019
]
IB67_06305
03036 Chromosome and associated proteins [BR:
frr03036
]
IB67_06305
Messenger RNA biogenesis [BR:
frr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
IB67_06305
Chromosome and associated proteins [BR:
frr03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
IB67_06305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
Spore_YhaL
LSM
EndoS_Ig-like
Motif
Other DBs
NCBI-ProteinID:
UXF01161
LinkDB
All DBs
Position
complement(1357662..1357958)
Genome browser
AA seq
98 aa
AA seq
DB search
MPKEKAKEKFNLQDRFLNIVRTRKIEVKVYLVNGFQAKGIVRSFDNFTVLLESGKQQTLI
YKHAISTILPSEYIMLMKTEEEEQKEEQEAQESEGEQI
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
gtgccaaaggaaaaggcaaaggaaaagttcaaccttcaggacagatttttgaacattgtt
agaacaaggaagatagaagttaaagtttacttagttaacggatttcaggctaagggtatt
gttagatcattcgataatttcacggttttattggagagtggtaaacagcaaactttaatt
tacaaacatgccattagtacgattttgccttctgaatacataatgctaatgaagaccgaa
gaagaggaacagaaggaagaacaagaggctcaggaaagcgaaggcgaacagatataa
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integrated database retrieval system