Fervidobacterium riparium: IB67_06490
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Entry
IB67_06490 CDS
T08552
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
frr
Fervidobacterium riparium
Pathway
frr00260
Glycine, serine and threonine metabolism
frr00460
Cyanoamino acid metabolism
frr00630
Glyoxylate and dicarboxylate metabolism
frr00670
One carbon pool by folate
frr00680
Methane metabolism
frr01100
Metabolic pathways
frr01110
Biosynthesis of secondary metabolites
frr01120
Microbial metabolism in diverse environments
frr01200
Carbon metabolism
frr01230
Biosynthesis of amino acids
frr01240
Biosynthesis of cofactors
frr04981
Folate transport and metabolism
Module
frr_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
frr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
IB67_06490 (glyA)
09102 Energy metabolism
00680 Methane metabolism
IB67_06490 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
IB67_06490 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
IB67_06490 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
IB67_06490 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
IB67_06490 (glyA)
Enzymes [BR:
frr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
IB67_06490 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
HdeA
Motif
Other DBs
NCBI-ProteinID:
UXF01196
LinkDB
All DBs
Position
complement(1388040..1389317)
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AA seq
425 aa
AA seq
DB search
MWESVKRSDPEIYEVILKEWERQEYGLELIASENFVSPAVMEAMGSVLTNKYAEGYPKKR
YYGGCEWVDVAETLARERAKKLFNAKYANVQPHSGSQANMGAYFALAEPGSVLMGMSLSH
GGHLTHGASVNFSGQIYKVVQYGVNPQTEVIDYDEVRRLALEHRPKIIVAGGSAYSRIID
FKRFREIADEVGAYLVVDMAHFAGLVAAGLYPNPLEYAHVVTSTTHKTLRGPRGGLILTN
DEEIYKAINKAIFPGIQGGPLMHVIAAKAVCFKEALTDEFKEYQKQIVANAKALAKALES
RGLRIVSGGTDTHLMLVDLNPLNVTGKAAETALGYCHITVNKNTIPNETRSPFVASGIRL
GTPALTTRGMKEEQMEEIAELIVTVLKNVKDEEGNVDEEVAKRVSDRVMELCKKFPLYQG
KIAVE
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtgggaaagcgttaagaggagcgatccagagatttatgaggttattttaaaagaatgg
gaaaggcaagaatatgggcttgagctaattgcctctgagaattttgtgtctccagctgtc
atggaggctatgggaagtgttttgacaaacaagtatgcggagggttatccaaagaaaaga
tactacggtggttgtgaatgggttgatgttgcagagacacttgcaagagaacgcgcaaag
aagcttttcaacgccaagtatgctaacgtacagccacactccggttctcaagcgaatatg
ggagcatattttgcgcttgcagaacctggttctgttttgatgggtatgtctttaagtcac
ggaggacaccttacacacggtgcaagtgttaacttttcgggacagatatataaagttgtc
cagtacggagtgaatcctcaaacggaagtaattgactacgatgaagtcaggagattagca
ttagagcacagaccaaagataatcgtagcgggtggaagtgcttactcaaggattatcgac
ttcaagaggtttagagaaatagcagatgaagttggtgcttacctcgttgtcgatatggca
cactttgctggtttggtggcagcggggttatatccaaatcctcttgaatacgcacatgtt
gtgacaagtacgacacataagacattgagaggtccgcgcggtggtttgattcttacaaac
gacgaagaaatctacaaggcgataaataaagcgatattccccggaatacagggcggtccg
ctgatgcacgttatcgcagctaaggctgtatgtttcaaagaagcgttgactgatgagttt
aaagaatatcaaaaacagatagtagcaaacgcaaaagctcttgcaaaagcccttgaaagt
agggggttgagaatcgtttccggcggtaccgatacacacttgatgctcgttgaccttaac
ccgctcaacgtaacgggtaaagctgcagaaacagcactcggatattgccatataacagtc
aataagaacacgattccaaatgaaacaaggtcaccatttgtggcgagtggaataagactt
ggaacaccggcactaacaaccaggggaatgaaggaagagcagatggaagaaattgccgag
ctcatcgtaacagtgcttaagaacgttaaggacgaggaaggaaatgtagacgaagaagtt
gcgaagagagtttccgaccgtgtcatggagctctgcaagaagttcccgctttatcaaggc
aagatagctgtcgaataa
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