Fervidobacterium riparium: IB67_08055
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Entry
IB67_08055 CDS
T08552
Name
(GenBank) phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
frr
Fervidobacterium riparium
Brite
KEGG Orthology (KO) [BR:
frr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
frr03019
]
IB67_08055
Messenger RNA biogenesis [BR:
frr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IB67_08055
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
HDOD
Cas3_HD
tRNA_anti_2
RMI2
Motif
Other DBs
NCBI-ProteinID:
UXF01486
LinkDB
All DBs
Position
1691969..1692943
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AA seq
324 aa
AA seq
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MREALEKLRPPYAEELRNFVDREIDGVFKVKSKRLQETKDGKKFLLLTLEDRTGSVRAID
WYNAELNDQVLQPGNVVSVSGKVVYFEEKVQINILNSQSAVRKLTENEYDVERFVGSVKN
VEELYKTLLRLVDKVRDNDYKEILKRFFVEDVSFAEAFKNAPAGMKIHHAYRGGLLEHSV
NVAKIVESVCNIYDDLDKDLLITGALLHDIGKVKEYVINQKGIEVTTDGELMGHILMGVE
MLSQKARGISYDKILRLKHLIASHHGEFEWGAPVLPKTPEALVLHFVENMDSKINRVFQI
IDKEDREKEWSEYDSNLSRRFFLR
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
ctgagagaagcactggaaaagttgagaccgccttacgcggaagagttgaggaattttgtt
gatagggaaatcgatggagtgttcaaagtaaaaagtaaacgactccaagagacaaaggac
gggaaaaagtttctactactgacccttgaagacagaacaggaagcgtaagggcaatagat
tggtacaatgcagaacttaacgaccaagttttgcaacctggcaacgttgtcagcgtttcg
ggaaaagtagtttatttcgaagagaaagttcaaataaacatcttgaattcacaaagcgct
gttaggaaattgaccgagaacgagtacgatgttgagagatttgttggaagtgtaaagaac
gttgaagagctctataagacgctattgaggctcgttgataaagtacgcgataacgactat
aaagaaattctgaaaaggttttttgtggaagatgtgagttttgcagaggcgtttaagaac
gcccctgctggtatgaaaatccaccatgcctacaggggcggattgttggaacactcggtt
aatgttgcaaagatagttgagagtgtttgcaacatctacgatgacctcgataaagacctg
ctcataactggagcactacttcacgatattggaaaagtaaaagaatacgttataaaccaa
aaaggtatagaggtaaccaccgatggtgaattgatgggacatatcctgatgggcgttgag
atgctctctcaaaaagcaaggggcataagttacgacaaaattctgcgcttaaaacactta
atagcttcgcaccatggggaattcgagtggggtgcaccagtgctcccgaaaacgccggag
gcattagttcttcattttgtagagaacatggactccaagataaatagagtctttcaaata
atagataaggaagacagagagaaagaatggagcgaatatgactcgaacttgagcagaaga
tttttccttaggtaa
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