Fervidobacterium riparium: IB67_08080
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Entry
IB67_08080 CDS
T08552
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
frr
Fervidobacterium riparium
Brite
KEGG Orthology (KO) [BR:
frr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
frr03016
]
IB67_08080
Enzymes [BR:
frr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
IB67_08080
Transfer RNA biogenesis [BR:
frr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IB67_08080
Prokaryotic type
IB67_08080
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
T4_y05I_C
Motif
Other DBs
NCBI-ProteinID:
UXF01491
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All DBs
Position
1697657..1698586
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AA seq
309 aa
AA seq
DB search
MLLVDKEKGPTSHDIVDRVRRLFSVKQVGHSGTLDPFATGLLVIGVGKATRLLEYLQHDT
KVYKVKFKLGVITDTFDITGQVMEENPVEVSEIEILEAVKSFVGTYKQVPPAYSAKKYQG
KKLYELAREGKIINLPPREVTIYDIYDIKIALPYVEFTTKVSSGTYIRSLCMDIGYKLGC
GATAVELRRISVGKFSVDDAINIPKIDRNENVDEIREKAIRSLIPIEQVLDFPKVEVNNV
ERIFNGVQPTVNDIIEIEDFEKDDLIQIYFQGKLIALAKAERSSSFINTLKKQSRNERIA
KLIKVFKEE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atactcttggtagataaagaaaaaggaccaacatcgcatgacatagtcgacagggtgaga
agactcttttctgtaaaacaagtgggccattcggggactttggacccattcgcaacaggg
cttttggtgataggtgttggcaaagcgacacgattacttgagtatctccagcacgataca
aaggtttacaaagtaaaatttaaactcggcgttataaccgatacgttcgatattactggt
caagttatggaagaaaacccagtcgaagtttctgaaatagaaattttggaggctgtaaaa
tcctttgttggaacttacaaacaagttccgcctgcgtattcagcgaagaaataccagggt
aagaagctttacgaactcgctcgcgaagggaagatcataaaccttccaccgagagaagta
acgatatatgatatttatgatataaaaatagcgcttccgtacgtggaatttacgacaaaa
gtttcttcgggaacatatatccggagcctttgcatggacataggatacaagcttggctgc
ggcgcaacagctgtcgaattgagaaggataagcgtaggaaaattctcagttgatgatgcg
ataaacattccgaaaatcgatagaaatgagaatgttgatgaaatccgggaaaaagccata
aggagtttgataccgatagaacaggtgcttgactttccaaaagttgaggtcaataacgtt
gaacgcatctttaacggtgtacagcctactgttaatgatataattgaaattgaagatttc
gaaaaagacgacttgatacagatatactttcaaggaaaattgattgctttagctaaagcg
gaacgcagttcgagttttatcaatactctcaagaagcagagcagaaacgaaagaatcgct
aaactcatcaaagttttcaaggaggaataa
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