Fervidobacterium riparium: IB67_10665
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Entry
IB67_10665 CDS
T08552
Name
(GenBank) integration host factor
KO
K03530
DNA-binding protein HU-beta
Organism
frr
Fervidobacterium riparium
Brite
KEGG Orthology (KO) [BR:
frr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
frr03032
]
IB67_10665
03036 Chromosome and associated proteins [BR:
frr03036
]
IB67_10665
03400 DNA repair and recombination proteins [BR:
frr03400
]
IB67_10665
DNA replication proteins [BR:
frr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
IB67_10665
Chromosome and associated proteins [BR:
frr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
IB67_10665
DNA repair and recombination proteins [BR:
frr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
IB67_10665
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
UXF01943
LinkDB
All DBs
Position
complement(2244242..2244517)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKKTLVNAVAEKTQLKKKDVKLVIDTLFETITAALEKGEKVQLVDFGTFEVKKMEGRTG
VNPRTKAKIKIPSRKVPKFRPGKVLKAKVNK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaagacacttgttaacgcggtagcggaaaagacacaactcaagaagaaagac
gtaaaacttgttatcgacactctctttgagaccattacagcagctctcgaaaagggagaa
aaagtacaacttgtagactttggtacatttgaagtcaagaagatggaaggaagaacaggc
gttaacccaagaacaaaagcaaagattaagattccttcaagaaaggttccaaaattcaga
cctggaaaagttctcaaggcaaaggtaaacaaataa
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