Falco rusticolus (gyrfalcon): 119140168
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Entry
119140168 CDS
T11606
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain isoform X1
KO
K19719
collagen type II alpha
Organism
frs Falco rusticolus (gyrfalcon)
Pathway
frs04510
Focal adhesion
frs04512
ECM-receptor interaction
frs04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
frs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119140168 (COL2A1)
04518 Integrin signaling
119140168 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119140168 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
frs00536
]
119140168 (COL2A1)
Glycosaminoglycan binding proteins [BR:
frs00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119140168 (COL2A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
119140168
NCBI-ProteinID:
XP_037227150
LinkDB
All DBs
Position
19:5612693..5630518
Genome browser
AA seq
1498 aa
AA seq
DB search
MPGRPLPPLRPLPLLRLLPLLLPLLLLLPPPPAAAQDRDLPEAGSCLQDGQSYRDKDVWK
PEPCRICVCDTGTVLCDEIICEELRDCPSPEIPFGECCPICPTDQPSGWQPGPKGQKGEP
GDIKDVVGPRGPPGPQGPAGEQGQRGDRGEKGEKGAPGPRGRDGEPGTPGNPGPPGPPGP
PGPPGLGGNFAAQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPSGSPGPQGFQGNPGE
PGEPGAAGPMGPRGPPGPPGKPGDDGETGKPGKSGERGPPGPQGARGFPGTPGLPGVKGH
RGYPGLDGAKGEAGAPGAKGESGSPGENGSPGPMGPRGLPGERGRPGPSGAAGARGNDGL
PGPAGPPGPVGPAGAPGFPGAPGSKGEAGPTGARGPEGAQGPRGESGTPGSPGPAGAPGN
PGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGP
KGETGPAGPQGAPGPAGEEGKRGARGEPGAAGPVGPPGERGAPGNRGFPGQDGLAGPKGA
PGERGPAGLAGPKGATGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPTGAPGEDGRPGP
PGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGP
AGERGEQGAPGPSGFQGLPGPPGPPGESGKPGDQGVPGEAGAPGLVGPRGERGFPGERGS
PGAQGLQGPRGLPGTPGTDGPKGATGPAGPNGAQGPPGLQGMPGERGAAGIAGPKGDRGD
VGEKGPEGAPGKDGARGLTGPIGPPGPAGPNGEKGESGPPGPSGAAGARGAPGERGEPGA
PGPAGFAGPPGADGQPGAKGEQGEPGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGA
QGPPGATGFPGAAGRVGPPGPNGNPGPPGPPGSAGKDGPKGARGDAGPPGRAGDPGLQGP
AGPPGEKGEPGEDGPAGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGA
PGSAGDRGPPGPVGPPGLTGPAGEPGREGNPGSDGPPGRDGAAGVKGDRGETGPVGAPGA
PGAPGAPGPVGPTGKQGDRGETGAQGPMGPSGPAGARGMPGPQGPRGDKGETGEAGERGL
KGHRGFTGLQGLPGPPGPSGDQGAAGPAGPSGPRGPPGPVGPSGKDGSNGMPGPIGPPGP
RGRSGEPGPAGPPGNPGPPGPPGPPGTGIDMSAFAGLGQTEKGPDPIRYMRADEAAGSLR
QHDVEVDATLKSLNNQIESIRSPEGSKKNPARTCRDIKLCHPEWKSGDYWIDPNQGCTLD
AIKVFCNMETGETCVYPNPSSIPKKNWWTSKTKDKKHVWFAETINGGFHFSYGDEDLAPN
TANIQMTFLRLLSTEGSQNVTYHCKNSIAYMDEETGNLKKAILIQGSNDVEIRAEGNSRF
TYSVLEDGCTKHTGKWGKTVIEYRSQKTSRLPIVDIAPMDIGGADQEFGVDIGPVCFL
NT seq
4497 nt
NT seq
+upstream
nt +downstream
nt
atgcccggccgcccgctgccgccgctgcgcccgctgccgctcctgcgcctgctgccgctc
ctgctgccgctcctgctcctgctgccgccgccgcccgccgccgcgcaggaccgcgacctc
cccgaggcaggcagctgcctgcaggacgggcagagctatcgcgataaggacgtgtggaag
ccggagccgtgccgtatctgcgtgtgcgacacggggaccgtcctctgcgacgagatcatc
tgcgaggagctgcgggactgccccagccccgagatccccttcggagagtgctgccccata
tgccccactgaccagcccagcggttggcaacctggccccaaggggcagaagggcgaaccc
ggtgacattaaagatgttgtaggaccccgagggccgccgggaccgcagggtccggcaggt
gagcaaggacaacgaggggaccgtggcgagaagggggagaagggcgctcccggcccccgg
ggcagggatggggaacccggcacccctggaaatcctggtccccccggcccccccggccct
cccggcccccccggcctcggtgggaacttcgcggcgcagatggcgggcggctttgacgag
aaggctggaggcgcgcagatgggcgtcatgcagggacccatgggccccatgggaccccgc
ggcccccccggaccctccggctctcccggtccccaaggatttcaaggcaaccccggtgag
cccggcgagcccggcgctgctggtccgatgggtccccggggaccaccgggacctcctggg
aaacccggcgatgacggcgagactggcaaacctgggaaatctggcgagcgcggccccccc
ggcccccagggtgctcgtggcttccccgggacgcccggtctccctggagtgaaaggccac
cggggttaccccggccttgacggtgccaaaggagaggcaggggctcctggagccaagggt
gaatccggctcccccggcgagaacggctcccctggccccatgggtccccgtgggctgccc
ggagagagaggacgtcccggcccctccggcgctgcgggtgctcgtggcaacgacggcctc
cctggcccagctggacccccgggacctgtcggcccagccggagcccccggcttccccggc
gcccccggctcgaagggtgaagctggtcccaccggcgcgcgaggtcctgagggtgcccag
ggcccccgcggtgaatccgggacccccggctcccccggccctgctggcgcccccggcaac
ccagggaccgacggcatccccggcgccaagggctcggcgggtgcccccggcatcgctggc
gctccaggcttccccggaccccgcggcccacccggaccccagggtgccactggcccgctg
ggacccaagggacagacgggagaacccggcatcgcgggcttcaaaggcgagcagggaccc
aagggcgagacgggacccgcgggaccccaaggtgcccccgggccggctggtgaggaaggc
aagcgaggagcccgcggtgaacccggtgctgctggccccgtgggaccacctggagagagg
ggtgctcctggcaatcgcggcttccccgggcaggacgggctggctggacccaagggtgct
ccaggcgagcgcggccccgctggcctcgcaggtcccaagggagccaccggtgaccccggc
cgccctggcgagcctgggctgcccggagccaggggtctcaccggccgcccaggcgacgct
ggtcctcaaggcaaagttggcccaacgggtgctcccggcgaggacggccgccctggcccc
cccggcccgcagggtgctcgaggccagcctggcgtgatgggtttccctggtcccaagggt
gctaacggcgagcctggaaaagccggcgagaaggggctgcccggcgccccggggctgcgg
ggtcttcccggcaaggacggcgagacgggagctgccggccccccgggacctgccggtccc
gcgggcgagaggggagagcaaggagcccccggcccctctggcttccaggggctgcccggg
ccaccaggtccccctggagagagcggcaaacccggagatcagggtgttcctggagaagct
ggtgcccccggtctcgttggtcccagaggtgaacgcggcttccccggtgagcgtggctct
cctggcgcccaagggctgcaaggtccccgtgggctccccggcacaccgggcactgacgga
cccaagggtgccaccggaccagctggccccaacggcgcccagggcccccccgggctgcag
gggatgcccggtgagagaggagccgccggcattgctggtcccaagggggaccggggagac
gtcggagagaagggccctgagggagcccctggaaaggacggcgcacgcggtctgacaggt
cccatcggtccccccggccccgctggccccaacggcgagaagggtgaatcgggacctcct
ggtccatccggtgctgccggtgcccgcggtgcccccggcgagcgcggtgagcctggtgcc
cccggtcccgccggatttgccggacccccgggtgccgacgggcaacctggtgccaaaggc
gagcaaggagagcccggccagaagggtgacgccggcgctccgggtccccaaggtccctcc
ggcgcacctggcccacagggtccaactggtgtaactggtcccaaaggagcccggggtgct
cagggcccccctggagccactggattccccggcgctgccggccgcgtgggaccacctggc
cctaacggtaacccaggcccccccggtccccccggctccgctggcaaagatggtcccaag
ggtgctcgtggcgacgccggtcccccgggccgtgctggtgaccccggtctccaaggcccc
gccggtccccctggcgagaagggcgaacccggcgaggacggccccgccggtcctgatggt
cccccaggtccccagggcttggcaggacagcgtggcatcgtcggtctgcctggacagcgc
ggcgagagaggcttcccggggctgcctgggccctcgggcgaacctggaaaacaaggagca
cccggctctgcaggtgaccgagggccccctggccctgtgggtccccccggtctgacgggt
cctgccggtgaacctgggcgcgagggtaaccctggctctgacggacccccgggcagggac
ggcgcggccggcgtgaagggtgatcgtggcgagaccggtcccgtgggtgcccccggtgct
cccggtgcccccggcgctcctggccccgtcggtcccactgggaaacaaggagacagaggc
gagacgggtgcacaaggtcccatgggtccctccggtcctgctggcgctcgaggcatgccg
ggtccccaggggcctcgtggtgacaagggtgagacgggagaggctggagagagagggctg
aagggccaccgtggcttcaccgggctgcagggtcttcccggaccacccggtccttctgga
gaccaaggcgctgctggccccgcgggtccctccggtcccaggggtccccctggccccgtt
ggcccctccggcaaagacggctccaacggcatgcccggccccatcggtccccccggcccc
cgcggacgaagcggcgaaccaggtcctgcgggtcctcctggaaacccgggtccccccggt
cctcccggccccccgggcactggcatcgacatgtcggctttcgccgggctgggtcagacg
gagaagggtcccgaccccatccgctacatgcgggcggacgaggccgccggcagcctccgg
cagcacgacgtggaggtggacgccaccctcaagtccctcaacaaccagatcgagagcatc
cgcagccctgagggctccaagaagaacccggccaggacctgccgcgacatcaagctctgc
catcccgagtggaagagcggagactactggatcgacccgaaccagggctgcaccttggac
gccatcaaagttttctgcaacatggaaacgggtgagacctgcgtctaccccaaccccagc
agcatccccaagaagaactggtggaccagcaagaccaaagacaagaagcacgtctggttt
gcagagaccatcaacggcggtttccatttcagctacggcgatgaggacctggctcccaac
accgccaacatccagatgaccttcctgcgcctcctgtccaccgagggctcccagaacgtc
acttaccactgcaagaacagcatcgcctacatggacgaggagacaggcaacctgaagaag
gccatcctcatccagggctccaacgacgtggagatcagagccgagggcaacagcaggttc
acgtacagcgtcctggaggacggctgcacgaaacacactggcaagtggggcaagacagtc
atcgagtaccggtcgcagaagacctcgcgcctgcccattgtagatattgcacctatggac
attggtggagccgatcaggagtttggtgtggatattggcccagtctgcttcttgtaa
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