Falco rusticolus (gyrfalcon): 119150796
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Entry
119150796 CDS
T11606
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
frs Falco rusticolus (gyrfalcon)
Pathway
frs04140
Autophagy - animal
frs04142
Lysosome biogenesis
frs04145
Phagocytosis
frs04148
Efferocytosis
frs05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
frs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
119150796 (VPS39)
04142 Lysosome biogenesis
119150796 (VPS39)
04140 Autophagy - animal
119150796 (VPS39)
04148 Efferocytosis
119150796 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119150796 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
frs04131
]
119150796 (VPS39)
Membrane trafficking [BR:
frs04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
119150796 (VPS39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
VPS18_solenoid_2nd
Motif
Other DBs
NCBI-GeneID:
119150796
NCBI-ProteinID:
XP_037249623
LinkDB
All DBs
Position
7:complement(49375721..49401738)
Genome browser
AA seq
884 aa
AA seq
DB search
MHDAFEHVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIKKDIGEVMSSESVCCNRF
EVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTC
DLQQSDTGEEVLRMCVAVRKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFK
RDYYLIRVDGKGSIKELFPTGKQLEPLVAPVADGKVAVGQDDLTVVLNEEGICTQKCALN
WTDIPIAMEHQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGTNIIYVASNHF
VWRLIPVSIATQIQQLLQDKQFELALQLAEMKDDSDSEKRQQIHHIKNLFAFNLFCQKRF
DESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPGLSGAELEKAHLALIDYLTQ
KRSQLVKKLNDSDHQSSTSPLMEGTPTIKSRKKLLQIIDTTLLKCYLHTNVALVAPLLRL
ENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQY
LQHLGTENLHLVFSYSVWVLRDFPEDGLKIFTEDLPEVEALPRDKVLSFLIENFKSLTIP
YLEHIIHVWEEIGAEFHNCLIQLYCEKVQGLMKEYLSSFPADKTPVPAGEEGGELGDYRK
KLLLFLEKSSWYEPSRLISDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTNMAENY
CHKHYDRNKDGNKDVYLSLLRMYLSPPSVHCLGPIKMEVLEPQANLQAALQVLELHHSKL
DTTKAINLLPANTQISEIRIFLEKVLEENAQKKRSNQVLKNLLHAEFLRVQEERILHQQV
KCVITEEKVCTVCKKKIGNSAFARYPNAIVVHYFCSKEVNTLDT
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgccttcgagcatgtgccgatcctggagaagctgccgctgcagatcgactgc
ctggcggcctgggaggagtggctccttgttggtaccaaacaagggcatctcctgctttac
aggatcaagaaggacataggagaggttatgtcatcagaaagtgtctgttgcaataggttt
gaagtgacgctagagaaatccaacaagaacttctcaaaaaagattcagcagattcatgtt
gtttctcagtttaaaattctggtcagtctattagaaaacaacatttatgtgcatgacctg
ttgacatttcaacaaatcaccacggtttccaaggcaaaaggtgcatctctctttacttgt
gatcttcagcagtcagatacaggggaagaggtgctcagaatgtgtgtggcagtgcggaag
aagctacaactgtatttttggaaggacagagagttccacgagctacagggggacttcagt
gtacctgatgtacccaagtctatggcctggtgtgaaaactccatctgtgtaggcttcaag
agggactattacctgatacgggtggatggaaaaggatccatcaaagaactgtttcccaca
ggaaagcaactggaaccattggtagctcctgtagcagatggaaaagttgcagttggccaa
gatgatttaacagttgtgctcaatgaagaagggatctgtactcagaagtgtgccttgaat
tggacagatattcctatagccatggaacaccagcctccctacatcatagctgttctgcca
aggtacgtggagatccgcacttttgaaccccggctgctggtacaaagtattgagctgcaa
agaccacgcttcatcacctctggaggcacaaatattatatatgtggcaagtaatcacttt
gtctggcggctgattccggtatcgatagctacacagatccagcagctcctgcaggacaag
cagtttgagttggctttgcagttggcggaaatgaaagatgattcagatagcgagaagcga
caacaaattcaccacataaagaacctctttgccttcaacctcttctgccagaagcgcttt
gatgaatccatgcaagtttttgccaagcttggtacagatcctactcatgtgatgggtctg
tatcctgacctcctgcccacagattacaggaagcagctacaatatcccaatcccctgcca
gggctgtctggggcagagctggagaaggcacatttagctctgatagactacctaactcaa
aaaagaagtcagctggtgaagaagctaaatgattctgaccatcagtccagtacctcaccc
ctcatggaaggaacacccacaatcaaatccagaaagaagctgctacaaatcattgatacc
accctgttaaagtgttacctccacacaaacgtagccctggtggcaccattgctacgtctg
gagaacaatcactgccatattgaggagagtgagcatgtactaaagaaggcacacaaatat
agtgagctgataatactgtatgagaagaaaggtctgcatgagaaagcattacaggtactg
gtggatcagtcaaagaaagcaaactcaccattgaagggtcatgagaggacagtgcaatat
ctgcagcatttgggcacagagaacttgcacttggtgttttcctactctgtctgggtgcta
agagattttcctgaagatggactgaagatatttacagaagacctccctgaagtagaagct
ttgcctcgagacaaagtgctcagcttcttgatagaaaattttaaaagcttgactattcct
tatctggaacacatcattcatgtctgggaagaaattggtgcagagtttcacaactgtctg
atccagctgtactgtgagaaggtgcaaggcttaatgaaagaatatctcagttctttccct
gcagataaaactccagtgcctgctggagaggaaggaggagaattgggggattaccggaaa
aagcttctgctttttctggagaagtctagctggtatgaacccagtcgactaattagtgac
ttcccctttgatggtctcctagaagaacgtgctctgctcttgggtcgtatggggaagcat
gagcaagctctgtttatttatgttcatattttgaaggacaccaacatggctgaaaactac
tgccataaacattatgacagaaacaaagatgggaacaaagatgtctatctgtcactgctc
cggatgtatctctccccacctagtgttcattgcctgggaccaattaagatggaagtactg
gagcctcaagccaatctgcaggctgctctgcaggttttggaactacatcacagcaaactg
gatactaccaaggcaataaacctgctcccagcaaatacacagattagtgagattcgaatc
ttcttagagaaagtccttgaagaaaatgctcagaagaaaagatctaatcaagtactcaag
aatcttctccatgcagagtttctgagggtccaggaggagcgaatcttgcatcagcaagtg
aagtgcgttattacagaggagaaagtgtgcactgtatgtaaaaagaagataggtaacagt
gcatttgctcgataccctaatgcaatcgttgtgcattatttctgctccaaagaagtcaac
acattggacacctga
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