Falco rusticolus (gyrfalcon): 119154940
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Entry
119154940 CDS
T11606
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
frs Falco rusticolus (gyrfalcon)
Pathway
frs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
frs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119154940 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
frs03019
]
119154940 (PATL1)
Messenger RNA biogenesis [BR:
frs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119154940 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
119154940 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
119154940
NCBI-ProteinID:
XP_037258894
LinkDB
All DBs
Position
10:complement(18808133..18819285)
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AA seq
768 aa
AA seq
DB search
MFRYQSLEDCPLDEDEDAFQALGEEDEDIDQFNDDTFGAGAVDDDWQEAHERLAELEDKP
VAAREQDGPSGEDAEADLLGEPEDMLAERLTRLVIDSELEDPAIMQAVQTRAPVQQPGGL
NSSIWDSSAVLRRMRGPLLTQEMPSVSVLDYALPQRPPQVREEDRDPSERVLPRRSSSPV
IGSPPVRAVPIGTPPKQAAMPNFNQQILCPKPVHIRATMQQRYPAPYGERMSPNQLCNVP
NSSLLGHPFPHSVSPVLTHLQRAQLLGGAQAGRMSPSQFARVSGLVGSPLPSVNPKLLQG
RVGQMMSPASGFRAFFGAPPAPPPSQPQHPPGPGSHLQGLRPQPQMFRPDTTHLHPQHRR
LLHQRQQQNRNQHRSLNGSVGDRGGHRSSHQEQIRKDPYANLMLQREKDWVSKIQMMQLQ
STDPYLDDYYYQNYFQKLEKLSAAEEVHGDGPKKERTKLITPQVAKLEHTYKPVQFEGSL
GKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRQTLVTIEKTYSLLLDVEDYERR
YLLSLEGERPALMGERKQKICDMYDNLRGKAPGQERPSDDHFMQIMCIRKGKRLVARILP
FLSPEQAADVLMATARNLPFLIKKDAQDEVLPCLLRPFSHVLYHLPLGTVTSLVQQLTNL
PQSATTPAPTNLHLTAVLQNKFGLSLLYLVLSRGEELQSSDVNTELMQDNQWTEVMLMAT
RELLRIPQAALAKPVSTPSNLISLFSRYVDQQKLNLLETKLHLVHGIR
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgttccggtaccagtccctggaggactgcccgctggatgaggatgaagacgccttccag
gccctgggggaggaggatgaagatatcgaccagttcaacgacgatacgtttggagccggg
gctgtggatgacgactggcaggaggcacatgagcggctggcagagctggaagacaaaccg
gtggcagcccgggagcaggatgggcccagtggtgaggacgcagaggcagacctactgggc
gagcccgaggacatgctggcagaacgcttgacccggctggttattgacagcgagctggag
gaccctgctatcatgcaggctgtgcagaccagggcccccgtgcagcagcctggagggctg
aactccagcatctgggacagctcagctgtcctgcggcgcatgcgggggccgcttctcact
caggagatgccatcggtgtctgtgctggactatgctctgcctcagagacctccccaggtt
cgagaggaagaccgggacccttccgagcgggtgctgccccggcgttcatcatcccctgtc
atcgggagtccccctgtccgggctgtccccattggtaccccccccaagcaggctgccatg
cccaacttcaaccagcagatcctgtgtccgaagcctgtccacatccgagctaccatgcag
cagcgctaccctgctccctacggcgaaaggatgtctcccaaccagctctgcaatgtaccg
aattcctccctcctgggccacccgttcccccacagtgtctctccagttctcacccacctg
cagagagcacagctgctcggaggagcccaggctggccgaatgtctcccagccagtttgcc
cgcgtctctggcctggttgggagccccctcccctccgtcaatcccaagctgctccagggc
agagttgggcagatgatgtctccagccagcgggtttcgtgccttcttcggggctcccccc
gctccacctccctctcagccgcagcacccgccgggccctggatcccacctgcagggcctg
aggccgcagcctcagatgttccgaccggacacgacccacctgcacccccagcaccgccgg
ctcctgcaccagcggcagcagcagaaccgaaaccagcaccgcagcctcaacggctcagta
ggggaccgagggggccaccggagcagccaccaggagcagatacgcaaagacccctacgcc
aacctcatgctgcagcgggaaaaggactgggtgtccaagatccagatgatgcagctgcag
agcactgacccctacctggatgattattactaccagaattacttccagaagctggagaag
ttgtcagcagcagaggaagtccacggcgatggtcccaagaaggaacgcaccaaactcatc
acacctcaggtggctaagctggagcacacctacaagccagtgcagtttgagggctcgctg
gggaagctcacggtttccagcgtcaacaacccccggaagatgatcgatgcggtggtgacc
tcccgcagcgaggatgatgagacgaaggagaagcaggttcgagacaagaggcgccagacc
cttgtcacaatcgagaagacgtatagcctcctcctggatgtggaggactatgagagacgc
tacctcctgagcctggaaggcgagcggccggccctgatgggcgagaggaagcagaagatc
tgtgatatgtacgacaatctgagggggaaagcgcccgggcaggagaggccgagtgacgac
cacttcatgcagatcatgtgcatccggaaagggaagcgcctcgtggcccggatcctcccc
tttttgtcacccgagcaagcagccgacgtactcatggcgaccgccaggaacctgcccttc
ctcatcaagaaggatgctcaggatgaggtgctgccctgcctgttaaggcccttctcgcac
gttctctaccaccttcccttggggacggtcaccagccttgtgcagcagctaacgaaccta
cctcagagcgcgaccacgccagcgcccaccaacctgcacctcactgctgtgctccaaaac
aagtttggcctgtccctgctgtacttggtcttgagccgtggggaggaactgcagagctcg
gacgtgaacacggagctaatgcaggacaaccagtggacggaggtgatgctcatggcaacc
cgagagctcctgcggatccctcaggcggccttggcgaagccagtgtccaccccctcgaac
ctgatctccctcttctctcgctatgtcgaccagcagaagctgaacctgctggagacaaaa
ttgcacttagtgcacgggatccggtag
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integrated database retrieval system
