Francisella salina: F7308_0126
Help
Entry
F7308_0126 CDS
T01560
Name
(GenBank) RNase R-related protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
frt
Francisella salina
Brite
KEGG Orthology (KO) [BR:
frt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
frt03016
]
F7308_0126
Enzymes [BR:
frt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
F7308_0126
Transfer RNA biogenesis [BR:
frt03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
F7308_0126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
TetR_C_19
Motif
Other DBs
NCBI-ProteinID:
AEI35054
LinkDB
All DBs
Position
130206..132080
Genome browser
AA seq
624 aa
AA seq
DB search
MLLENQSIKNALVIFKSKPAKVVEILDKKIEIEILDSKNIKLPAKNVQILTVVDHDFDLD
KLERLEIPELELTWELLQEQQQTSIDELSELLFESVGANQAYTVWLLVSEGEYFSFNDDF
TINIHTQEQKDQVVRNKHEKLKKEQELNDFIERLNNKTFNVEDTKFLKEIEALATLKSTK
CRFFKYLNMEESENSAYKLLLDIGYWDEFFNPYLYRYGVELESNTTDFKYNSESDSQRAD
LTHLTAYAIDDEGSNDPDDAISWDAQQNKMWVHIADPSSSISFGDEVDLEARARGSNLYV
PEHIITMLPPQATQKLGLGLQEVSPALSVGFRIDESGDIHDIEICFSNIKVTRYSYEFVE
ENISNLELGEIEIYAKYFTDKRLAKGAVELDFPEIKILLDNDKNVKLTDLPRLNSRTLVR
DTMLMAGVAIGQFCKENNICVPFSTQPEHDLKQDDLENIDSIADMFATRKKLQRGKYSTE
PDVHAGMGLDSYVQVTSPLRRYLDLLVHYQLRNFLENKQMISVDDVDNIIAQVDIPIKSN
RQTERFSNSHWKLVYLMQNPNLEFQAAVIEKLDKGRLMVSIADLAMTKKLAVSGKYDLND
QIKLQNTSVNLVTQEAFFKVIEEN
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgttacttgaaaatcagagcattaaaaatgccttagtaatttttaaatcaaaacctgca
aaggttgtagagatattagataaaaaaatagaaatagaaattttagatagtaagaatata
aaattacctgcaaaaaatgttcaaatacttacagttgtagaccatgatttcgatttggat
aagcttgagagattagaaattcctgagttagagttaacatgggaattattgcaagaacag
caacaaacgtctattgatgaattaagtgagcttctttttgaatccgtaggagctaatcaa
gcttatactgtatggcttttggtttcagagggagagtattttagctttaatgatgacttt
actatcaatattcatacacaagagcaaaaagatcaagtagtcaggaataaacatgagaag
ctcaaaaaagagcaagaactaaatgattttatagaacgtctaaataataagacttttaat
gtcgaagacacaaagttccttaaagagatagaggctttagcaacacttaaaagtacaaaa
tgtcgtttctttaaatatttaaatatggaagagtctgagaatagtgcgtataagctactc
ttggatattggttattgggatgaattctttaacccttatctatatcgatatggtgtggaa
ttagaaagtaatactactgattttaagtataattctgagtcagatagtcagcgtgctgat
ctaacacatctgactgcctatgctatagatgatgagggtagtaatgatcctgatgatgca
attagttgggatgctcaacaaaataaaatgtgggttcatatcgctgacccttcttctagc
attagttttggagatgaagtagatcttgaggctagagcacgaggttctaacttatatgtg
ccagagcatataattacgatgttgccacctcaggcaacacaaaagttaggtttgggtcta
caagaagtttctccagctttgtcagtagggtttagaattgatgagtcgggtgatattcat
gatattgagatatgttttagtaatataaaagttactagatattcttatgagttcgttgaa
gaaaatatctctaatctagaactcggagaaatagagatttatgctaaatatttcactgat
aagcgtttggcaaaaggagcggtagaacttgattttcctgagataaaaatattattagat
aatgataagaatgtcaaactaactgacttaccacgcttaaactcaagaacattggtgcgt
gatactatgctgatggctggagttgcgattggacagttttgtaaagaaaataatatttgt
gtacctttttcgacacagccagagcatgatcttaaacaagacgatttagagaatattgac
tcaatagctgatatgtttgcaacacgtaaaaagctccaaagaggtaagtactctacagaa
cctgatgttcacgcaggtatgggtttagattcttatgtacaagtgacaagccctctaaga
agatatttagatttacttgttcattatcaattacgtaatttcttagaaaataagcaaatg
attagtgttgatgatgttgataatataattgctcaagtagatattcctattaagtcaaat
agacaaacggagcgtttttctaattctcattggaaattagtctatctaatgcagaatcct
aatttagagttccaagcagcagttattgaaaaattagataaaggtcgtttaatggtttct
atcgcagatttagcgatgactaaaaaacttgctgttagtggtaagtacgatttaaatgat
caaataaaattacaaaatacctctgtaaaccttgttacacaagaggctttctttaaggtt
attgaagagaattaa
DBGET
integrated database retrieval system
