Francisella salina: F7308_0969
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Entry
F7308_0969 CDS
T01560
Name
(GenBank) Exodeoxyribonuclease V alpha chain RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
frt
Francisella salina
Pathway
frt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
frt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
F7308_0969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
frt03400
]
F7308_0969
Enzymes [BR:
frt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
F7308_0969
DNA repair and recombination proteins [BR:
frt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F7308_0969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
AAA_11
UvrD_C_2
UvrD-helicase
Helicase_RecD
UvrD_C
SLFN-g3_helicase
SH3_13
ResIII
AAA_22
DEAD
AAA_12
nSTAND3
PhoH
Flavi_DEAD
NACHT
TIP49
PIF1
TrwB_AAD_bind
SRP54
RecD_N
AAA_24
Terminase_6N
AAA_7
AAA_28
FtsK_SpoIIIE
NTPase_1
AAA
AAA_16
CbiA
Motif
Other DBs
NCBI-ProteinID:
AEI35896
LinkDB
All DBs
Position
995165..996940
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AA seq
591 aa
AA seq
DB search
MYKTFHQACEQLADIRAIDFFFAKEVFDLVKKTTPSIITLSSELYPPLHGAKGNNLEQKS
NEVLFHILIKLMHVYSHGHSCLKIVNISNKTIFASEKTNQSDAKVGFKMPSFDEIVSIFE
SLDYDKLPIYFAKEYDSLYIKRLWNYEVEIANFIKSRTIQNTQQDNHIEEVVDKLFEPAD
EIDWQKQAVIKSLNYNFSIISGGPGTGKTTTVAKLLLAIQMSNQNQQRIALLAPTGKAAQ
RMTESLNSVLSKRVDSDNYLGLSNLEAQTIHRFLGLRPNSTHVKYNEQSKAPYDVIIVDE
ASMLDMNIFIKLIRAVADNTKLILIGDTNQLPSVEAGSLFANFTHHRDGDITPYTTLLIK
NYRSQQYINNLAASVLKGDINIDSHQNENINFHSIRNLDTYLRDYAKRYSQLEKCRDYKE
ALTELNKFRILVANKNLEIGTDKLNQKIEKFMCKPIDSNYKGKPIMITQNSYSLGLFNGD
VGIIWPDDTGKLRAYFDGKDAKAFSLNMLPKYESVYVMTIHKTQGSEFDEIVIVLPAEDN
EALSKQLLYTAITRAKHKLTIISEQSSLRDIAQKDIKRNSNISELVSLSTQ
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaactttccatcaagcttgtgagcaattagcagatattagagctatagatttt
ttctttgctaaagaagtgtttgatttagtcaaaaagactactccatctataatcacttta
tcaagtgagttatatccaccccttcacggagcgaaggggaacaatttggaacaaaaaagt
aatgaagttttatttcatattttgataaagcttatgcatgtatatagccatggtcatagc
tgtttgaagatagtaaatatatcaaataaaactatttttgcttcagagaaaactaatcaa
agcgatgctaaagtaggctttaaaatgccaagttttgatgaaattgtaagtattttcgag
tccttagattatgataaattacctatatattttgctaaagagtatgattccttatatatc
aaaagattgtggaattatgaggttgaaatagctaactttataaaatcaagaacaatccaa
aatactcaacaagataaccatattgaagaagttgtagataagctgtttgaacctgctgat
gagatagattggcaaaaacaggcagttatcaaaagtctaaattataattttagtattatc
tcaggtgggcctggtacaggtaagacaactacagtcgcaaagcttttgcttgctatacaa
atgagtaatcaaaatcagcaaagaatagctcttttagcaccaacaggtaaggctgcccag
agaatgacggaatccttaaatagtgtattaagtaaaagggtagacagtgataattattta
ggattatctaatctagaagctcaaactatacatagatttttaggcttaaggccaaactct
actcatgttaaatataacgagcagtcaaaagcaccatacgatgtgattattgttgatgaa
gcttcgatgcttgatatgaatatctttattaagttgattagagcagttgctgataatacc
aagctaattttgataggtgatactaatcagttaccatcagttgaggctggtagtcttttt
gcaaactttacacaccacagagatggagatattacgccatatacaacattacttatcaaa
aactatcgttcacaacaatatataaataatcttgcagcctcagttctaaaaggtgatatt
aatattgatagtcatcaaaatgagaatattaattttcatagcataaggaatttagatact
tatttaagagattatgcaaagagatattcacagcttgaaaagtgccgtgactacaaagag
gctcttaccgagctaaataaatttagaatacttgtagctaataaaaatctagaaattggt
acagataagttaaatcagaaaattgagaaatttatgtgtaaacctatagattctaactat
aagggtaaaccaattatgataactcaaaatagttattcattgggattattcaatggagat
gtagggattatctggccagatgatactggtaagcttcgagcttattttgatggtaaagat
gctaaggcttttagtctaaatatgctaccaaaatatgaaagtgtctatgtgatgacaatt
cataagacgcaaggttcagagtttgatgaaatcgtgattgttcttccagcagaagataat
gaagcgttaagtaaacaacttttgtatacagctattaccagagcgaaacataaattaacg
attatttctgaacaaagtagtttaagagatattgctcagaaagatattaagagaaattca
aatattagtgaattggttagcttgagcactcaatag
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