Francisella salina: F7308_1333
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Entry
F7308_1333 CDS
T01560
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
frt
Francisella salina
Pathway
frt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
frt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F7308_1333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
frt03019
]
F7308_1333
Enzymes [BR:
frt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
F7308_1333
Messenger RNA biogenesis [BR:
frt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
F7308_1333
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_19
AAA_30
MerR-DNA-bind
HI1480
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AEI36259
UniProt:
A0ABM5MAL0
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All DBs
Position
1366320..1367657
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AA seq
445 aa
AA seq
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MQFSDLGLNPLICSALEKKGYTKPTPIQAKAIPLVLKGNDVMASAQTGTGKTAGFTLPII
QRLLDQPKAQANRVKTLILTPTRELAAQIQEQIQIYAANTHIRSAVVFGGVSINPQMMKL
RKGVEILIATPGRLLDLYSQNALKFDSLNTFVLDEADRMLDMGFINDLKRIHKLLPKKLQ
TLMFSATFSPEIKNLASEFLDNPQSVSADVVNTTVKKITQKIYTLDKSTKINALISLIKD
QDLHQVLVFSRTKHGANKISEKLNKASITSSAIHGNKSQTARTKALADFKSKDINVLVAT
DIAARGIDIAQLPCVINLDLPNVAEDYVHRIGRTGRAGQDGLAISLVSADEVESLSNIEH
LIGHLLPREELEGFEATHNVPITSMSRKTKAKKIDEVKIIAAKRANKNNKNTNQKKSSNH
NKDFAKKIKQKIHQNKSVRKPKAQD
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcaattctcagatttaggtttaaatcctttaatatgtagcgctttagaaaaaaaaggc
tatacaaaaccaactccaattcaagccaaagcgattccattagttttaaaaggtaatgat
gtcatggcatctgcccaaacaggaacaggcaagacagcaggcttcacattaccaattatc
caaagacttcttgatcaaccaaaagctcaagcaaatcgagtcaaaactctaatcctaact
ccaacaagagagttggcagcacaaatacaagaacaaattcaaatatatgcagcgaatact
catattcgttcagcagtggtttttggtggtgttagtatcaatcctcaaatgatgaagtta
cgcaaaggagttgagattttgatagcgactccaggtaggttacttgatttatatagtcaa
aatgctcttaaatttgatagtttaaatacatttgttttagacgaagcagacagaatgtta
gatatgggttttattaatgatttaaaaagaattcataagcttttaccaaaaaagttacaa
acattaatgttctcagctacattttcaccagagataaaaaatcttgcaagtgaatttctt
gataatcctcaatcagtatcagcagatgttgtaaatacaacagtcaaaaagattacgcag
aaaatttatacactagataaatcaactaagattaatgctttgatttcactaataaaagat
caagatctacatcaggttttggttttttcgcgtacaaagcatggcgctaataagatatca
gagaagctaaataaagctagtataacaagtagtgcaatacatggtaataaaagccaaaca
gctagaacaaaggcattagcagattttaaatccaaagatataaacgtcttagttgcaacc
gatatcgcagcacgaggaattgatattgcccaactaccatgtgtaatcaatcttgatcta
ccaaatgtagctgaagattatgtccatagaataggcagaactggtagagcagggcaagat
ggtctagctatttctttagtaagcgcagatgaagttgaatcactatcaaatatagaacat
ttaattggacatctgttaccacgagaagagttagaaggttttgaggctactcataatgta
cctattacaagtatgtcacgtaaaactaaggctaaaaaaattgatgaagtcaaaataata
gcagccaaaagagctaataaaaataataaaaacactaatcaaaagaaaagctcaaatcat
aataaagattttgcaaaaaagataaaacaaaaaattcatcagaataaaagtgtcagaaag
ccaaaggctcaagattaa
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