Francisella salina: F7308_1652
Help
Entry
F7308_1652 CDS
T01560
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
frt
Francisella salina
Pathway
frt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
frt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F7308_1652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
frt03400
]
F7308_1652
DNA repair and recombination proteins [BR:
frt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F7308_1652
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F7308_1652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
AAA_16
nSTAND1
AAA_23
AAA_22
AAA_33
AAA_21
Viral_helicase1
cobW
DnaJ_CXXCXGXG
NTPase_1
NACHT
HlyD_D4
Motif
Other DBs
NCBI-ProteinID:
AEI36576
LinkDB
All DBs
Position
complement(1675149..1677974)
Genome browser
AA seq
941 aa
AA seq
DB search
MKKIIIKGAKTHNLRNIDVEIPRDKLTVITGLSGSGKSSLAFDTLYAEGQRRYVESLSSY
ARQFLSMMDKPDVEHIEGLSPAISIDQKTTSHNPRSTVGTVTEIYDYLRVFFARAGTAKC
PVHHIELKAQTVSQMVDKILEFDEKARLMILAPIISQKKGTHHTLLDKILAQGYIRVRIN
GDFFNLDEDYPELDRYKKHNIDVVVDRFKPKKDNEQRIAESIETALDLGNGIVKLADMTN
ENAEDILFSSKHACPLCDYALKELSPRIFSFNSPLGACSSCDGLGVKEFFDEKKVIIDPA
ISLKHGAIVKWNKTNQYYYSQLESLAEHYKFLLDEPFEKLSKKVQEIILYGSGDESIKMT
VDSIRGGRQTRVKSFEGVIPHFERRYYESDSDMVKKDLYELMSNLKCKSCSGTRINEYAR
NIFIADKNIADVCALSIDDLLKWLDELEFVGQQKVIAENLLKEIKLRVEFLANVGLEYLS
LSRQADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNQRLLDALHNLKDLGN
TVIVVEHDEDAIRQADYVIDMGPKAGVHGGEVVASGNYQTIIKNKKSLTADYLSGRKKIE
VPDKRLKAYKNRFIEINGATGNNLQGDNLKVPVGVLTCVTGVSGSGKSTLINRTLYPLAS
RLLNRSTLVPMEYKSHKGFNHFDKVIDIDQSPIGRTPRSNPATYTGVFTPIRELFAATAE
SRSRGYSPGRFSFNVRGGRCEACQGDGVIKVEMHFLADVYVACDVCEGKRYNRETLAVQY
KGKNIYEVLEMTVEDALGFYDAVPSIRTKLEALMSVGLSYIKLGQSATTLSGGEAQRVKL
AKELSKRSTGKTLYILDEPTTGLHFYDIHQLLKVIMDLRDRGNTVVIIEHNLDVIKMADW
IVDLGPEGGSKGGQIIFEGTSEDIVKCKKSYTGKYLKKLLY
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaattatcattaagggtgcaaaaacccataacttaagaaatattgatgttgag
atacctagagacaagcttactgttattacaggtttgagtggttctggtaaatcatcatta
gcatttgatacgctatatgcagaaggccaaagacgctatgtcgaatcattgtcttcttat
gctaggcagtttttatcaatgatggataagccggatgttgagcatatagagggcctttcg
ccggctatctcaattgatcagaaaacgacatctcacaacccaagatctacagttgggacc
gttacagaaatatatgactatctgagagtcttctttgctagggctggaactgctaaatgt
ccagtacatcatattgagcttaaagcacagacagttagccagatggttgataaaatttta
gagtttgatgagaaagctcggttaatgatacttgctccgatcatttctcagaagaaaggt
actcaccatactttgttagataaaatattagcacagggttatatccgcgttcgtataaat
ggtgatttttttaatctagatgaggattatccagagttagatcgctataagaaacataat
atagatgttgtagttgatagatttaagcctaagaaagacaatgagcaaagaattgcagag
tctatagagaccgctttagatcttggtaatggtatcgtcaaattagcagatatgactaac
gaaaatgctgaagatatcttattctcatcaaagcatgcttgtccgttgtgtgattatgct
ctcaaagagctatctccaagaatcttttcatttaatagtccattaggggcttgtagtagt
tgtgatggtctgggggtcaaagaattctttgatgagaagaaagtaataatagaccctgca
atttcgcttaagcatggagcaattgttaagtggaataaaacaaatcaatactactattca
caattagaatccttggctgagcattataaatttttattagatgagccttttgagaaatta
tctaagaaagttcaagaaataatcttgtacggttctggtgatgaatctattaagatgact
gttgattcaattagaggtggtagacaaactagagttaaatcatttgagggagtcatacct
cattttgagcgtagatactatgagtctgactcagatatggtcaaaaaagatctctatgag
cttatgagtaaccttaagtgtaagtcttgtagtggtactagaattaatgaatatgctaga
aacatatttatagcagataaaaatatagcagatgtgtgcgctttatctatagatgattta
ttgaagtggcttgatgaattagagtttgtcggacagcaaaaagttattgcagagaattta
cttaaagagatcaagctaagagttgaatttttagcaaatgttggtttggagtatttaagt
ctttcaagacaggctgatactctttcgggtggtgaagcacagcgtattcgtttagctagt
cagattggtgctggattggttggcgttatgtatatcttggatgaaccttctattggtctt
catcagagagataatcaacgccttttagatgcattgcataatcttaaagatttaggtaat
acggttatcgttgttgaacatgatgaagatgcaattaggcaagctgattatgttattgat
atggggccaaaggctggtgttcatggtggtgaagtagttgcatcaggaaattaccagact
attatcaaaaataaaaaatctttgactgctgattatttaagtggtcgcaagaaaatagaa
gtgccagataaaaggctgaaagcttataagaatcgttttattgaaataaacggagcaact
ggcaataatttacaaggtgataacttaaaagttcctgttggtgttttgacttgtgtaacc
ggtgtatcagggtctggtaaatcaactttgattaatagaacattatatcctctagcatca
agattattaaatagaagtacacttgtacctatggaatataaatcacacaaaggatttaat
cattttgataaggttattgatattgatcagtcgccaataggacgtactcctcgttcaaat
ccagctacatatacaggtgtctttacaccgataagagagctgtttgcagctacagcggag
tctaggtctagagggtatagtccaggaagatttagcttcaatgttcgcggaggtagatgt
gaggcttgtcaaggtgatggtgttataaaagttgagatgcatttcttagctgatgtatat
gtggcttgtgatgtttgtgaaggaaagcgttataatcgtgaaactctagctgtacagtac
aaggggaaaaacatatacgaagtattagagatgactgtggaggatgctctaggattctat
gatgctgttccgagtatcaggactaaattagaagctttaatgagtgtcggattgtcttat
attaagttaggccaaagcgcgactaccttatctggtggagaggctcaaagagttaaacta
gctaaagagctttcaaaacgctcaacaggcaaaactttatatattttagatgaacctact
acaggactacacttttatgatattcatcagcttttaaaagtaattatggatctgcgtgat
agaggtaatacggtagtaattattgagcataatcttgatgttattaagatggctgattgg
atagtggatttgggtcctgaaggtggaagtaaaggcggacagataatttttgagggaaca
tcagaagatattgtcaaatgtaaaaaatcttatacaggtaaatacttaaaaaaattattg
tattaa
DBGET
integrated database retrieval system
