Francisella salina: F7308_1771
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Entry
F7308_1771 CDS
T01560
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
frt
Francisella salina
Pathway
frt03410
Base excision repair
frt03430
Mismatch repair
frt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
frt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F7308_1771
03430 Mismatch repair
F7308_1771
03440 Homologous recombination
F7308_1771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
frt03400
]
F7308_1771
DNA repair and recombination proteins [BR:
frt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
F7308_1771
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
F7308_1771
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
F7308_1771
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
DUF7222
Motif
Other DBs
NCBI-ProteinID:
AEI36695
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Position
1803477..1805219
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AA seq
580 aa
AA seq
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MLIKQKQTNQKVLDTLISKGYDTFLSKIISSRVNNFENIDLILKGSIKDLSSPFLFKDID
KAVDRLFQALQNNEIIGLETDHDCDGQTSHAILYEALTKIFNYPQEKIRSYIGHRMQEGY
GLSESLMNRILTDRIRPSLVITADNGSTDEPRIAVLKQNGIDSIVTDHHGIPPEGPPQSA
IAILNPTQHDCNYPDKAVAGCMVAWLFMAALRRKYLQNAKSLSKSYGLSNLLDFVAIGTV
ADCVSMANSHNNRIVTKLGIEQLKNNDRLCWDFLDKEKLSSEYISFSIAPLLNSDGRVSD
ALGSVSFLLENDERKIEETYENLTKQNNQRKEIQKKLTHEAITKAHQLNDDNFSLCILLD
DGHSGIHGITASRVKEMFGKPVIIFSETQNDSNLISGSARSIDNINIKTILDTIALKSPT
LMIKYGGHKGAAGLTINKSDFDTFYDLFESEIINFVKNNNISLEPILEYDFELDENDFRL
QTLEKIESLEPFGREFEKPLFYNSFTIENLRLVGKDKNHAQLVLRYKNIPSIKAIWFNAS
DNKITKHIAIGDTIRACYELQKEEFLGQTNLSLNIKLIKK
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgctaataaaacaaaaacaaactaaccaaaaagttttagatactttgatatcaaaaggt
tacgatacattcttatcaaaaataatctcttctagagtaaataattttgagaatattgac
cttatattgaaaggatcaatcaaagatctatcatccccctttctcttcaaagatatcgat
aaagccgtagatagactttttcaagcgttacaaaataatgaaatcattggattagaaacc
gaccatgactgtgatggccaaacatctcatgcaattttatatgaagcgctgacaaagata
tttaattaccctcaagaaaagattcgttcatatataggtcacaggatgcaggaaggatat
ggtctatcagagtctttgatgaataggatattaacagatagaattagaccaagccttgtt
ataacagctgacaatggttcaacagatgagcctaggattgcagttcttaaacaaaatgga
atagacagcattgtaacagatcaccatggtattccaccagaaggccctccgcaaagtgct
atagcgatacttaatccaactcaacatgattgtaactatccagacaaagctgtagctggc
tgtatggttgcttggctttttatggcagctcttcgtagaaaatatctgcaaaatgctaaa
tcattatctaagtcttacggattaagtaatttacttgactttgttgcaattggtacagtt
gcagactgtgttagcatggcaaatagtcacaacaaccgcattgttacaaaactaggtata
gagcaactaaagaataacgatcgtctatgttgggacttcttagataaagagaagctatca
agtgagtatattagctttagtatagctcccttgctaaatagtgatggaagagtttctgat
gcattaggatctgttagcttcttacttgaaaatgatgaacgcaaaattgaagaaacatac
gaaaacctaaccaagcaaaataaccaacgtaaagaaattcaaaaaaagcttactcatgaa
gcaataactaaagctcatcaactgaacgacgacaatttctctctgtgtatattacttgat
gatggccattctggaattcacggtataaccgcaagtagagtcaaagaaatgtttggcaaa
cctgtcattattttttctgaaacacaaaatgattccaacttaatatcaggctctgctaga
agtatagataatattaatatcaaaaccatccttgatactatagcacttaaatcacctact
ttgatgataaagtatggtggtcataaaggagctgctggcttaacaattaataaatctgat
ttcgatactttttatgatttatttgaaagtgaaattatcaatttcgttaaaaacaataat
atatctttagagcctattttagagtatgattttgagcttgacgaaaatgatttcagacta
caaactctagaaaagatagaatctcttgagccatttggtagagaatttgaaaaacctcta
ttttacaatagtttcactatagaaaatctacgtttagttggtaaagataaaaaccatgct
caactagttttacgctataaaaacattccttcaatcaaagcaatatggtttaatgcttca
gacaataaaataactaaacatatagctattggcgatactataagagcctgttatgagctc
caaaaagaagaatttctcggacagacaaacttatctctcaatattaaacttatcaaaaaa
tga
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