Fructobacillus americanaquae: M3M36_01200
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Entry
M3M36_01200 CDS
T08234
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fru
Fructobacillus americanaquae
Brite
KEGG Orthology (KO) [BR:
fru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fru03016
]
M3M36_01200 (truB)
Enzymes [BR:
fru01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
M3M36_01200 (truB)
Transfer RNA biogenesis [BR:
fru03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
M3M36_01200 (truB)
Prokaryotic type
M3M36_01200 (truB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
DUF6210
GD_AH_second
Motif
Other DBs
NCBI-ProteinID:
USS92260
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All DBs
Position
complement(278272..279204)
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AA seq
310 aa
AA seq
DB search
MMAIEKHPELSGLLVVNKPKEMTSFGVVARLRRITGQKKIGHAGTLDPNVEGVLVVALGK
ATKLIDLLQSRPKTYTGTVTFGYATESQDADGAVVVQRPLTTAIDQSQLNTARADLTGDI
IQIPPIYSAVKVNGKRLYEYARAGEKVELPKREATIYRFDQTSPLTWVEGQPYQQMDFLA
QVSKGTYIRTLAYDLGQKLGLPATMTALKRTAGSGFTIDQAVLLDDLLAMDYPKILTQVH
SLESVLTWPKKLLTQEEIFAVKNGQKIPASSWPQNDVGYYQVYDQDRLLAVYAFDADQNV
WRSRYFFAQN
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaatagaaaaacaccccgaactatccggtctgctggtcgtcaataagccaaag
gaaatgacctcctttggtgtggttgcgagattacggcggataaccggacagaaaaaaatt
ggccacgcggggaccttggatccaaacgtcgagggcgttttggtggtcgccttagggaag
gcaaccaagttaattgaccttttgcaaagtcggccaaaaacctatacgggtacggttacc
tttggctatgcaacggagagccaggatgctgatggggcggttgttgtgcagcggcctttg
acaacggccattgaccagagtcagctcaacaccgctcgagctgatttgaccggggacatt
atccagattccaccaatttattcggcggtcaaggtcaacgggaagcgcctctatgaatat
gcgcgagcgggagaaaaggttgagctgcctaagcgggaggcgacgatttaccgcttcgac
cagactagtccgttaacctgggttgaggggcaaccttaccagcaaatggacttcttagct
caagtttcaaagggaacttatattcggactttggcctatgaccttggtcaaaaattagga
ctgccagcgacgatgacggccttgaagcggacagctgggtctggttttaccatcgatcag
gctgttttgcttgatgacttattggcgatggactatcctaaaattttaacccaagtgcat
tcacttgagtccgttttgacttggccaaagaagttgttgacccaagaggagatctttgcg
gttaagaatggtcaaaaaattccggccagttcttggccacaaaatgatgttggttactat
caagtatatgaccaagaccggttgctggcagtctacgcttttgatgctgaccaaaatgtt
tggcggtcgcgttacttctttgcccaaaattga
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