Fructobacillus americanaquae: M3M36_02055
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Entry
M3M36_02055 CDS
T08234
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
fru
Fructobacillus americanaquae
Brite
KEGG Orthology (KO) [BR:
fru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fru03019
]
M3M36_02055
03009 Ribosome biogenesis [BR:
fru03009
]
M3M36_02055
Enzymes [BR:
fru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
M3M36_02055
Messenger RNA biogenesis [BR:
fru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M3M36_02055
Ribosome biogenesis [BR:
fru03009
]
Prokaryotic type
rRNA helicases
M3M36_02055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
SWI2_SNF2
NAT10_TcmA_helicase
AAA_22
ApbA
Motif
Other DBs
NCBI-ProteinID:
USS92422
UniProt:
A0ABY5C0Y4
LinkDB
All DBs
Position
complement(456336..457694)
Genome browser
AA seq
452 aa
AA seq
DB search
MKNTNQQFGEYNLKPEVLSALKAIGFDQPTPIQARLIPTILRGGDVVGQSQTGSGKTHTF
LVPIFNALQPELNQTQVVITTPSRELAAQIAKAAREFAEKMELVKVSIAEYVGGTDKARQ
VRQLEKHQAQIVVGTPGRLKDLVQSGALVVNQVRTLVVDEADMTLDMGFLNEVDFLAGAM
PKDLQTLVFSATMPEKLKPFLKKYLDNPDFQTIPTEATIADTIDNWLVPTKSKDKEEVID
KLLTIFNPYLALIFANTKERAKELAAHLRGRGLKVAEIHGDIPPRERRRTMKGVLHLDYQ
YVVATDLAARGIDIEGVSHVINDGVPDELEFFVHRVGRTGRNGLAGTAVTLYGPDEEDRI
AELEKIGIEFAHKQIRGDEVVAVKDRKARTQRHATTNKLDPEMVGMVKKKKKNIKPGYKR
QIKNKIKRKRQMDRRIELRQDRRNTRRQNKEG
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacacaaaccaacaatttggtgaatacaatttaaagccggaagtcctttcggct
ttaaaggcgattggttttgaccagccaacgcctatccaggcgcgcttgattccaacaatc
ctgcgtggtggggatgttgttggtcagtcacagacggggtctgggaagacgcatactttc
ttggtacccatttttaacgccttgcaaccagaattgaatcaaacccaggtggtgattacg
acaccatcacgggaattggctgctcagattgcaaaggctgcccgtgaatttgcggaaaag
atggaattggtgaaggtttctattgccgaatatgttggtgggacggataaggcccgccaa
gttcgccagttagaaaagcaccaagcgcaaattgtcgttggaacgccaggacggttaaag
gatttggttcaaagtggggccttggttgttaaccaggtgcggactttggttgtcgatgaa
gcggatatgacacttgatatgggcttcttaaacgaagttgatttcttggccggtgcgatg
ccaaaagacctgcaaacgttggtcttttcagcaacaatgccagaaaagttgaagccgttc
ttaaagaagtatttggacaatccggatttccaaacaattccaacggaagcgacgattgcc
gataccatcgacaactggttggtgccaactaagtccaaggacaaggaagaggttatcgat
aagttgctgacgattttcaatccttatttggcgttgattttcgccaatacgaaggaacga
gctaaggaattagcagcacatttgcgtggccgaggtctcaaagttgccgaaattcatggc
gatattccaccacgtgagcgaaggcgaacgatgaagggtgtcttgcacctggattaccaa
tatgtcgttgcgactgatttagctgctcgtgggattgatattgaaggggtttcgcatgtc
attaatgatggtgtgccagacgaattagaattcttcgttcaccgtgttggtcgaacggga
cgaaatgggctggctggaacggctgtgaccctttatggacctgatgaagaagaccgcatt
gccgagttggaaaaaatcggtatcgagtttgctcataagcagattcgtggggatgaagtt
gtggcggtcaaggatcgaaaggcccggacacagcgccatgcaacaactaataagttggac
cctgaaatggttgggatggtcaagaaaaagaagaagaacatcaagcctggctataagcgt
caaattaagaataagattaagcgtaagcgtcaaatggatcgtcgaatcgaacttcgtcaa
gatcgccggaatacgcgtcgtcaaaataaggaaggctaa
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