Fructobacillus americanaquae: M3M36_02320
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Entry
M3M36_02320 CDS
T08234
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
fru
Fructobacillus americanaquae
Pathway
fru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M3M36_02320 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fru03019
]
M3M36_02320 (rny)
Messenger RNA biogenesis [BR:
fru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M3M36_02320 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
V-ATPase_G_2
KH_KhpA-B
KH_2
DUF816
Propep_M14
Motif
Other DBs
NCBI-ProteinID:
USS92470
LinkDB
All DBs
Position
complement(503907..505463)
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AA seq
518 aa
AA seq
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MGMIIISAFFALIIGLAGGYFVKRILDKMRLNNAKQVAANILKQANDEAKSIKRDAEVDA
KDLAQKYRHEVIESLSGREKKVEAQETRLQDRTDTLDQKDATLNQRDASLIQKENQVQSQ
LEKATKKADAAQATLTAQEEKLQEIAALTREQAKEQILAETSAQLDRERAALIQEYEIDA
KSEGEKRARNVVVEAIQRSAADTVSDVTVSVVNLPGEEMKGRIIGREGRNIRTLEALTGI
DLIIDDTPESVVLSGFDPLRRQIAKNALEALISDGRINPAKIEEAVEKARRQMDENIRQK
GEEAVFELGLRGLHPDLIKLIGRMNYRTSYGQNVLQHSIEVAKITGLMAAEFKMDVAQAK
RAGLLHDIGKAVDAEVEGSHVELGVRLAEKYQEKPVVVNAIAAHHGDTEAISPLADLVAA
ADAISAARPGARSESLENYVKRLTDLENIADGYRGVKSAYAIQAGREVRVIVEPAKVTDI
QATVLAHDIKAEVEEQLEYPGHVKVTVVRETRAVDYAR
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgggtatgattattatttcagcattctttgctttgataatcggcttggctggtggctat
tttgtaaaacgcatcttagacaagatgcgcttaaataacgccaagcaggttgcagcaaac
attttaaaacaagcaaatgatgaagccaaaagtattaaacgggatgcagaagttgacgcc
aaggacttggcccaaaagtaccgtcatgaggtgattgaatcactgtcggggcgggaaaaa
aaggttgaagcccaggaaacccgtctgcaggatcggacagatactttggaccaaaaagac
gcaactttgaaccagcgagatgcttcgctgattcaaaaagaaaaccaggtgcaaagccag
ttagaaaaagccacaaaaaaggctgatgctgcgcaggctactttgactgcacaagaagag
aagttgcaggaaattgcggcattaactcgagaacaggcgaaggagcaaatcctagccgaa
acgagtgctcagttggatcgtgaacgagcagcactgattcaagagtatgaaattgatgct
aaaagtgaaggcgaaaaacgggcaagaaacgtggtcgtggaagcaatccagcgttcagct
gctgacactgtttcagatgtcacagtttctgttgtgaacttacctggtgaggagatgaag
ggtcgaattattggtcgtgaaggccgcaacattcgaacgcttgaggcattgactggaatt
gatttgattatcgatgatacaccagagtcagtcgtcttgtcagggtttgatcccctacgt
cgccaaattgctaaaaacgccttagaggctttgatttctgatgggcgaattaatccagcc
aagattgaagaagctgttgaaaaggcgcgtcgccaaatggatgaaaatattcgtcaaaag
ggtgaagaggctgtctttgaactaggactgcgtggcttgcacccagacttaatcaagtta
attggtcgaatgaattatcggacatcatacgggcaaaacgtcttgcaacactcaattgag
gtagcaaagatcaccggtttgatggctgccgaatttaaaatggatgttgcacaagcaaag
cgtgctggtctcttacatgatattggtaaggctgttgatgcggaagttgaaggttctcac
gtagaactaggcgttcgtttagctgaaaagtatcaggaaaaaccagtggttgtgaatgcc
attgccgcccaccacggcgatacggaggcaatttcaccactagctgacttggtcgcagca
gcggatgcaatttccgctgctcgtccgggtgctcgctcggaatcgctggaaaactacgtc
aagcgtctgactgaccttgaaaatattgcggatggttatcggggtgtcaaatcagcctat
gctatccaagccggtcgggaggttcgtgtgattgttgagcctgccaaagtgaccgacatt
caagcaacggttttggcccatgatattaaggccgaagtcgaagaacaacttgaatatcca
ggtcacgtcaaggtgacggttgttcgagaaactagagcagttgattacgcgcgttaa
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