Fructobacillus americanaquae: M3M36_06640
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Entry
M3M36_06640 CDS
T08234
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
fru
Fructobacillus americanaquae
Brite
KEGG Orthology (KO) [BR:
fru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fru03019
]
M3M36_06640
Messenger RNA biogenesis [BR:
fru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M3M36_06640
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
HDOD
HEAT_PSME4_mid
Motif
Other DBs
NCBI-ProteinID:
USS91982
UniProt:
A0ABY5C0S7
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All DBs
Position
1377675..1378715
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AA seq
346 aa
AA seq
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MAKLLLQYRENDPVDAFALLKKAEVRQTKTGKDYLALTFADRSGDIPGNLWDVTKEGIEQ
FQAGRVVKVTGTRSAFKGNPQIQISQLRLTDNGEPSSAADFIKSAPVKKADLEAELTDTI
FKITQPIWNRLVRQLFKKFHDDFMEFPAAKTNHHAFARGLAFHSLSIARLAETVSDLYPQ
LNKDLLLAGALLHDLGKVIELSGPASTEYTRAGKLIGHITLIDEQLVLAVNELKMDLNQE
DVLILRHVVLAHHGLLEYGSPVRPQMMEAEILHQLDEMDASIQMLTGAMEQTEPGEFSKR
IFAMDNRAFYRPEGVQRAEGPTDDDLPPLPPEDPEAGSPIDPTALF
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggctaagttattattacagtaccgcgaaaatgatccggttgatgcctttgccttgtta
aagaaggctgaagttcgtcaaacgaagactggcaaggattatttggctttgacctttgcc
gataggtcgggtgatattcctggaaacctgtgggatgtgactaaagaaggcattgaacag
tttcaagctggccgagtcgttaaggttacgggtactcggtcagcttttaaaggcaacccg
caaattcaaatcagtcaacttcgtttgactgataatggtgaacctagttcagcagcagat
tttatcaaaagcgcccctgttaaaaaagctgatttagaagcagagctaacggatacaatc
tttaagattactcagccaatatggaaccgcttagttcgccaattgttcaagaagttccac
gatgactttatggaatttcctgctgccaagacgaaccaccatgcctttgctcgtggcttg
gcctttcatagcctgtcaattgcgcgcttagcggaaacggttagcgatctttatcctcag
ttaaataaggacttgttgctggccggtgcgcttttgcacgacttgggcaaggtgattgag
ctttcaggaccggcctcaacggagtatactcgggccggcaagctgatcggccatatcacg
ctgattgacgagcaactggttttagcagtcaatgagctgaagatggatttgaatcaggag
gatgttctgattttacgacacgttgtgctggcccatcatggtcttttggagtatggatca
cccgttcgcccccagatgatggaagccgaaattctgcatcagttagatgagatggatgct
tcaattcaaatgctgacgggtgctatggaacaaacagaacctggtgagttttccaagcgg
atttttgccatggataaccgggccttttaccgtccggaaggtgttcaaagagcagagggg
ccaacggatgacgatttgccaccgctaccaccagaagaccctgaagcggggtcgccaatt
gacccaacggcgctgttctga
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