Francisella uliginis: F7310_02945
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Entry
F7310_02945 CDS
T05017
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
frx
Francisella uliginis
Pathway
frx03410
Base excision repair
frx03430
Mismatch repair
frx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
frx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F7310_02945
03430 Mismatch repair
F7310_02945
03440 Homologous recombination
F7310_02945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
frx03400
]
F7310_02945
DNA repair and recombination proteins [BR:
frx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
F7310_02945
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
F7310_02945
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
F7310_02945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
DUF7222
Motif
Other DBs
NCBI-ProteinID:
API86372
UniProt:
A0A1L4BRA7
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Position
594355..596100
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AA seq
581 aa
AA seq
DB search
MLIKQRLFNQEVLDHLLANQYDGFLAKLIAARVSDISNIDLILKGSVKDLSSPFLFKDID
KAVDRLYVALQNNEVIGLETDHDCDGQTSHAIFHEALTKVFGYSQDKIRSYIGHRMKEGY
GLSESLMKRILTDDVRPSLIITADNGSTDEPRIAVLKQNGIDTIVTDHHGIPPEGAPKSA
IAVLNPTQNGCNYPDKAIAGCMVAWLFMAALRRKYIQNNKPVSKSYGLSNLLDFVAIGTV
ADCVSMANSYNNRIVTKLGIQQLKENDRLCWDFIDRDKLSSEYIGFSIAPILNSDGRVSD
ALGSVSFLLEEDDEKIENIFNNLKDQNNQRKDIQKQITQEAIVQASDLNNTKKSLCILLE
NGHSGIHGISASRIKEMFGKPVIIFSQTQNDPNLISGSARSIDDIHIKQVLDKIANLDSD
LMLKYGGHKGAAGLTIKYQDFAKFYDLFESQVENIVNSENIVLEPCIEYDFELGVDDFNL
DTLTKIESLEPYGREFDKPIFCNDFSIEQIRLVGKDKNHAQLVLRYKNTTSIKAIWFNAT
DNAVVDEIAIGDTVRVCYQLQKEEFLGQVNLSLNIKALEKL
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgttaattaaacaacgattatttaatcaagaagttttagatcatctattagctaatcag
tatgatggctttttagctaagcttattgctgcaagagttagtgatataagtaatatagac
ttaattctaaaaggttctgtgaaagatttatcatcaccatttttatttaaagatattgat
aaggcagttgataggctttatgtagcattacaaaataatgaagttataggattagaaaca
gatcatgattgtgatggtcagacttctcatgctatcttccatgaagcattaacaaaagtt
tttggttactctcaagataaaattcgttcttatataggtcatagaatgaaagagggttat
ggtctatcagaatctttgatgaagcgtattttaacagatgatgtccgaccaagtttaata
ataacagcagataatggttcaacagacgagccaagaatagcggtacttaaacaaaatggc
atagatacgattgtaacagatcaccatggcatacctccagagggagctccaaagagtgct
atagcagtacttaatccaacacagaacggatgtaattatcctgataaagcaattgctggt
tgtatggttgcttggctttttatggcggctttaagaagaaaatatattcaaaataataaa
ccagtatctaaatcatatggcttgagtaacctattggattttgtcgctattggaacagtt
gcagactgtgtgagtatggcaaatagttataataaccgtattgttacaaaactaggtatc
cagcagctaaaagaaaatgatcgcctatgctgggactttatagatagggataaattatct
agcgagtatataggttttagtatagcaccaattttaaatagtgatggacgagtatcagat
gcattaggttcagtaagctttttgctagaagaagatgatgagaaaattgagaatattttt
aataatcttaaagatcagaataaccaacgtaaggatatccaaaaacaaattactcaagaa
gctatagttcaagctagtgatttaaataatactaaaaaatctttgtgtatcctacttgag
aatggtcattcaggtattcatggtatctcagctagtagaatcaaagagatgtttggtaaa
cctgtgataatattctcccaaactcaaaatgacccaaacttaatatcaggctcggctcga
agtattgatgatattcatattaagcaagtactggataagatagcaaacttagattctgat
ttaatgcttaagtatggtggacataagggagctgcaggattaactattaagtatcaagat
tttgctaaattttatgatctttttgaaagccaagttgagaatattgtaaatagtgaaaat
atagttcttgaaccttgtattgaatatgattttgaacttggtgtagatgattttaatcta
gatactttaacaaaaatagaatctttagaaccgtatggtagagagtttgataaacctatt
ttttgtaatgatttctctatagaacaaatccgtttagtaggtaaagataaaaatcatgca
caattagttttacgctataaaaatacaacatctataaaagcaatatggtttaatgccact
gataatgctgtagtagatgagatagctataggtgatactgtgcgagtatgttatcagttg
caaaaagaagagtttcttgggcaggttaatttgtcgttgaatataaaagcactagaaaaa
ttatag
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