Francisella uliginis: F7310_06555
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Entry
F7310_06555 CDS
T05017
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
frx
Francisella uliginis
Pathway
frx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
frx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
F7310_06555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
frx03400
]
F7310_06555
Enzymes [BR:
frx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
F7310_06555
DNA repair and recombination proteins [BR:
frx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
F7310_06555
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F7310_06555
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F7310_06555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Exonuc_X-T_C
Motif
Other DBs
NCBI-ProteinID:
API87037
UniProt:
A0A1L4BT83
LinkDB
All DBs
Position
complement(1397809..1399257)
Genome browser
AA seq
482 aa
AA seq
DB search
MFDNQTFLFYDLETSGINNSFDQVLQFAAIRTDLDFNEIQRFNFFVKLNPDTTPSPMATI
THHISIAQANTGISEYDAIRKIHKIINTPGTISIGYNTLGFDDEFLRFAFYKNMLPPYTH
QFKNNCSRADLFPIVACYSAFFKQGLKWPKVTDDEGQQKISLKLENLNQENSLYSGGRAH
DAITDVIVTVELAKKLKSTNPKMWQFLLDKFNKQNDENTLSQLDVGVEIGDHEYRQAIAI
SGIFGSKNNFTSAILDLGQHRHYKNQEIFLRLDSYLFSEFIEEFGSLEAEYWRLTINKKW
GDIPLILPAKTRFVGKLPQERLELIKANKEFIKNNPKTFANFVDYVLEYKYSEIENIDVD
AAIYQSDFMTSADERGCDKFHSSAIYQKAQMLNQLPGKFYDRAVRIIGRLDFSKLPEKSQ
MEFQEYLNKIVSLDNDELLVDHRGKTRKTLEDIYQEMQDVRINKDLTEEQQALLYELEEY
LF
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataatcagactttcttattctatgacttagagacaagtggtataaataactca
tttgatcaggttttacagtttgccgcgattcggacagacttggattttaatgagatccaa
aggtttaatttttttgttaaactaaacccagatactactccatcacctatggcgacaatc
actcatcatatctcgattgcccaagcaaatactgggatatctgaatatgacgcaattcga
aaaattcataaaataataaatactccaggaactattagtattggttataacactcttggt
tttgatgatgagtttttaaggtttgctttttataaaaatatgttgccaccgtacacgcat
caatttaagaataattgctcaagagctgatttatttccaatagttgcttgctatagtgct
tttttcaaacaaggactaaaatggcctaaagttacagatgatgaaggccagcaaaaaata
tctttaaaattagagaatctaaatcaagaaaatagcctttatagtggtggtagagctcat
gatgcgattacagatgtaattgtcactgtagagcttgctaaaaaattaaaatcaacaaat
ccaaaaatgtggcaatttttattggataagtttaataaacaaaatgatgagaatacttta
tctcagttagatgttggtgtggaaataggagaccatgagtataggcaggctatagctata
agtggtatttttggttcaaaaaataatttcacatcggcaattttagatttaggtcagcat
agacattataaaaatcaagaaatattcttacgtttagatagttatctttttagtgagttt
atagaagagtttggtagtttagaggctgagtattggcgtttgacgatcaataaaaagtgg
ggtgatattccattaattttgcctgcaaagacacgctttgtaggcaagctaccacaagaa
aggttagagcttattaaagcaaataaagaatttataaaaaataatcctaaaacttttgct
aactttgttgattatgtattggaatataaatattcagagattgagaatattgatgtggat
gctgctatttaccaaagtgattttatgactagtgctgatgagagaggttgtgataagttt
cacagttctgctatatatcaaaaagcccagatgcttaatcaattaccaggtaagttctat
gatagagcagtgcgtataattggtaggttagatttctcaaaattacctgaaaaatctcaa
atggaatttcaagagtaccttaataaaattgtaagtttggataatgatgagttgttagta
gatcatcgtggcaagactcgtaagacattagaagatatttatcaagaaatgcaagatgtt
cgaatcaataaagatctgacagaagagcaacaagctttgttatacgaattagaagaatat
ttgttctaa
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