Fastidiosipila sanguinis: C5Q98_01965
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Entry
C5Q98_01965 CDS
T05345
Name
(GenBank) integration host factor subunit alpha
KO
K03530
DNA-binding protein HU-beta
Organism
fsa
Fastidiosipila sanguinis
Brite
KEGG Orthology (KO) [BR:
fsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fsa03032
]
C5Q98_01965
03036 Chromosome and associated proteins [BR:
fsa03036
]
C5Q98_01965
03400 DNA repair and recombination proteins [BR:
fsa03400
]
C5Q98_01965
DNA replication proteins [BR:
fsa03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
C5Q98_01965
Chromosome and associated proteins [BR:
fsa03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
C5Q98_01965
DNA repair and recombination proteins [BR:
fsa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
C5Q98_01965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
AVM42072
UniProt:
A0A2S0KM12
LinkDB
All DBs
Position
complement(479388..479663)
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AA seq
91 aa
AA seq
DB search
MNKSELVSSVAELSGLTKKDSEAAVNAVLESIASALEKDEKVVLVGFGTFEVRTRKAREG
RNPATQETIQIPESKNAAFKAGKKLKDRVNK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagagtgaattagtaagttcagtagctgaactttcaggtttaacaaagaaagat
tcagaagcagctgtaaacgcagttttagaaagcattgctagcgctttggaaaaagatgaa
aaagttgttttagtaggtttcggtacttttgaagtacgtacacgtaaagctcgtgaaggt
agaaatcctgcaactcaagaaacaattcaaattccagaaagcaagaatgctgcattcaaa
gcaggtaaaaaattaaaagatcgcgttaacaagtaa
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