Fastidiosipila sanguinis: C5Q98_05195
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Entry
C5Q98_05195 CDS
T05345
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
fsa
Fastidiosipila sanguinis
Pathway
fsa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C5Q98_05195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsa03400
]
C5Q98_05195
Enzymes [BR:
fsa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
C5Q98_05195
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C5Q98_05195
DNA repair and recombination proteins [BR:
fsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C5Q98_05195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AVM42644
UniProt:
A0A2S0KNR1
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All DBs
Position
1192188..1193039
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AA seq
283 aa
AA seq
DB search
MYMPELPEVETITRNLNINLVGQKLLSIDFLRKDIIAEKLNPVSEYLLLGESIIKVFRYG
KYLLFQFTNNYLMIVHLRMTGKLLYLPLLSEEDKNLYLNHKHTHVIFNFSDGELLFNDVR
RFGKIYFSKIDNSVTLEELLNSGPDALSENFSKDYLYQRSQKSPKKAIKTFLLDQKIVAG
IGNIYADECLFLAAIKPNRAAASLTREESSTLHDKIIQVLEDSILSGGTTFSDYRTADNH
KGNFQNKLFVYGRAGESCRICSNTLESIKIAGRTTVYCPKCQI
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgtatatgccagaattaccagaagttgaaacaataacaagaaatttaaatattaactta
gtaggtcaaaaattactaagtatcgattttctcagaaaagatattattgctgagaaatta
aatcctgtttctgagtatcttttattaggggaatcaataataaaagttttcagatacggt
aagtatcttctatttcaatttaccaataattacttaatgattgttcatctaaggatgact
ggaaagttgctatatttacctcttctaagtgaagaagataaaaatttatatttaaatcat
aagcatactcatgttatttttaatttttctgacggagagttgctatttaatgacgttcga
cgtttcggtaaaatttattttagtaaaatagacaattctgttaccttagaagaattatta
aactctgggccggatgctttatcagaaaacttcagcaaagattatttatatcaaagatct
cagaagagccctaaaaaagccattaaaacatttttacttgatcagaaaattgttgcgggt
attggtaatatctacgctgatgaatgcctatttttagctgccattaaacctaatagagct
gccgcaagtttaactagagaggaatcatctaccttacatgataaaataatccaagttcta
gaagattcaattctttccggaggaactacttttagtgattatagaaccgctgataatcat
aagggtaactttcaaaataaactatttgtttacggacgagctggagaaagttgtagaatc
tgttctaatacattagagtccattaaaattgcaggaaggactactgtgtattgccctaaa
tgtcaaatataa
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