Frondihabitans sucicola: GCM10025867_04820
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Entry
GCM10025867_04820 CDS
T09158
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
fsb
Frondihabitans sucicola
Pathway
fsb00900
Terpenoid backbone biosynthesis
fsb01100
Metabolic pathways
fsb01110
Biosynthesis of secondary metabolites
Module
fsb_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
fsb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
GCM10025867_04820
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
fsb01006
]
GCM10025867_04820
Enzymes [BR:
fsb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
GCM10025867_04820
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
GCM10025867_04820
2.5.1.29 geranylgeranyl diphosphate synthase
GCM10025867_04820
Prenyltransferases [BR:
fsb01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
GCM10025867_04820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
BDZ48241
LinkDB
All DBs
Position
complement(451636..452664)
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AA seq
342 aa
AA seq
DB search
MLVDRVLADFFAAAKRRATALGPRYVDLWDVLERNSVGGKRFRPRMVVAAYEALGGTDDE
ACALVGAAFELLHTALIVHDDVIDRDFSRRGIPNVSGSYRDTATTAGIASPAAEHRGMSA
ALIAGDLALAGASRLLLGVTCAEDVRFGLLELLDEAIFASAGGELLDVELALAREVPSVQ
EVLDMERAKTAVYSFEAPLMAGALLAGAERPLIDALESFGREVGIAYQIVDDLLGVFGSE
ADTGKTTLGDLREGKRTVLIAEAATTGEWFAIRPFIGKSDLTEAEAEHVRGRLVSCGARA
QAERLVDEHAARALAVLDGDIVPADLRVILRPVVDTVLERDR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
gtgctggtcgaccgggttctcgcagacttcttcgccgccgccaaacggcgcgcaacagcc
ctcggcccgcggtacgtcgacctgtgggacgtcctcgagcgcaactcggtcggcggcaag
cgcttccggccgcggatggtcgtcgccgcgtacgaggcgctgggcggcaccgacgacgag
gcctgcgccctggtgggcgccgccttcgagctcctccacacggcgctcatcgtgcacgac
gacgtgatcgaccgcgacttctcccggcgcggcatccccaacgtctccggcagctaccgc
gacaccgcgaccacggccggcatcgcgtcgccggccgccgagcaccgcgggatgtctgcg
gcgctgatcgccggcgacctcgcgctcgccggggcgagccggctcctgctcggcgtcacc
tgcgccgaagacgtccgcttcggtctgctcgagttgctcgacgaggcgatcttcgccagc
gccggcggcgagctgctcgacgtcgaactcgccctggcgcgcgaggtgccttccgtgcaa
gaggtgctcgacatggagcgcgcgaagaccgccgtctactcgttcgaggctccgctgatg
gccggcgcgctgctcgccggggccgagcgcccgctcatcgacgccctcgagtcgttcggc
cgcgaggtcgggatcgcctaccagatcgtcgacgatctcctcggggtcttcggcagtgag
gccgataccggcaagaccaccctcggcgacctccgcgagggcaagcgcaccgtcctcatc
gccgaggccgccacgacgggggagtggttcgcgatccgcccgttcatcggcaagtccgac
ctgacggaggccgaggccgagcacgtccgcgggcgattggtgagctgcggggcgcgagcc
caggcggagcgcctcgtcgacgagcacgccgcccgggcgctggccgtgctcgacggcgac
atcgtgcctgccgatctgcgcgtgatcctgcgccccgtcgtcgacaccgtgctcgagcgc
gaccgatga
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