Frondihabitans sucicola: GCM10025867_04920
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Entry
GCM10025867_04920 CDS
T09158
Name
(GenBank) hypothetical protein
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
fsb
Frondihabitans sucicola
Brite
KEGG Orthology (KO) [BR:
fsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fsb03021
]
GCM10025867_04920
Transcription machinery [BR:
fsb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GCM10025867_04920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_16
HTH_28
Motif
Other DBs
NCBI-ProteinID:
BDZ48251
LinkDB
All DBs
Position
457709..458464
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AA seq
251 aa
AA seq
DB search
MEVDGRIDLSNRSGDETHAAGETSRETSNFFGGPLRSLWEFAGGVNLAERPRGLAAEREA
PPGPDPSLLDTATDGLLARRASDGDEHAFETLLRRHLSLMTAYATRLTASRADASDAVQE
ASIAIWRELPTLTAPDAVRGWMMKIVSRKAFDLIRSRKPTADVDDDAVVAQLPVTDAGDP
ARLAVSADAMSGLRRALDALPALQRQAWILREVGGESYGEIAEHLGITTTAARGQLARAR
ENLTREMEAWR
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggacgggcggatcgacctctcgaaccgctctggagatgagacgcacgccgcc
ggcgaaacgtcacgcgaaacgtcgaactttttcggaggcccgcttcgcagcttgtgggag
tttgctgggggagtgaatctcgccgaacgcccgcgaggcctggccgccgaacgcgaggcg
ccgcccgggccggatccgtcgctgctcgacacggccaccgacggactcctggcgcgtcgc
gcgtccgacggcgacgagcacgcgttcgagacgctcctgcgccggcacctttcgctcatg
accgcctacgcgacgcgattgaccgcttcgcgcgccgacgcctcggacgcggtccaagaa
gcgtcgatcgccatctggcgcgagctgcccaccctcacggcgccggacgccgtgcgcggc
tggatgatgaagatcgtctcgcgcaaagccttcgacctcatccgctcgcggaagccgacg
gccgacgtcgacgacgacgccgtggtcgcgcagttgccggtgaccgacgccggtgatcct
gctcgcctcgccgtctcggccgatgccatgtcggggctacgccgcgcgctcgacgcgctg
cccgcgctgcagcggcaggcctggatcctgcgcgaggtcggtggcgaatcgtacggcgag
atcgctgaacacctcggcatcacgaccaccgcggcccgcggccagctcgcccgggcccgc
gagaacctgaccagagagatggaggcgtggcgatga
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