Frondihabitans sucicola: GCM10025867_09320
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Entry
GCM10025867_09320 CDS
T09158
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
fsb
Frondihabitans sucicola
Brite
KEGG Orthology (KO) [BR:
fsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fsb03032
]
GCM10025867_09320 (gyrB)
03400 DNA repair and recombination proteins [BR:
fsb03400
]
GCM10025867_09320 (gyrB)
Enzymes [BR:
fsb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GCM10025867_09320 (gyrB)
DNA replication proteins [BR:
fsb03032
]
Prokaryotic type
DNA Topoisomerases
GCM10025867_09320 (gyrB)
DNA repair and recombination proteins [BR:
fsb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GCM10025867_09320 (gyrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
BDZ48691
UniProt:
A0ABN6XYE7
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All DBs
Position
856032..858014
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AA seq
660 aa
AA seq
DB search
MSPNSPDGTDHSYEASDIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEIVDNSVDEALA
GYCDTILVTIREDGGIRVIDNGRGIPVDIHPVEKKSTVEVVLTVLHAGGKFGGGGYAVSG
GLHGVGSSVVNALSTELDVEVRRQGSVWRQSFTDGVPVAPLAQGEETTETGTTITFWPNA
EIFETVDFDYETLRARFQQMAFLNKGLRITLADERPVPEDAPEGTVAKSDDFFYEKGLED
YVEYLNKTKKVEVVHEDIISFEAEDTERRMALEVAMQWNTSYSESVHTYANTINTHEGGT
HEEGFRAALTTVVNKYGRDKALIKEKDDNLSGEDVREGLTAVISIKLGEPQFEGQTKTKL
GNTDAKSFTQKIAFDQLNDWFDRNPKQAQAVIRKGLSAQAARLAARKARDQTRRKGVLES
NGMPGKLKDCQSKDPALSEIFLVEGDSAGGSAVQGRNPETQAILPLRGKILNVEKARLDR
ALGNNEVQAMIKAFGADIGDDFDPDKARYHKIVLMADADVDGQHITTLLLTLLFRYMRPL
IDLGYVYLAMPPLFKLKWSNAPHEYVYSDLERDALTLAGRAEGKRMPKDNGIQRYKGLGE
MDYKELWETTMDPETRTLRQVTLDDAVAADAIFNTLMGEDVELRRNFIQQNAKDVRFLDI
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccgaattcgcctgatggcaccgaccactcctacgaagcaagcgacatccaggta
ctcgaagggctcgaggccgttcgcaagcgtccgggcatgtacatcggctcgactgggccg
cgcggtctgcaccacctggtctacgagatcgtcgacaactccgtcgacgaggccctcgcc
gggtattgcgacaccattctggtgaccattcgcgaagacggcggcatccgcgtcatcgac
aacggccgcggcatcccggtcgacatccacccggtcgagaagaagtcgaccgttgaggtc
gtcctcaccgtcctccacgccggaggcaagttcggcggcggcggctacgccgtctccggc
ggcctccacggcgtcggctcgtccgtggtcaacgcgctctccaccgagctcgacgtcgag
gtccggcgtcaggggtcggtgtggcgtcagagcttcaccgacggcgtccccgtcgcaccg
ctcgctcagggcgaagagacgaccgagaccggcaccaccatcaccttctggccgaacgcc
gagatcttcgagaccgtcgacttcgactacgagacgctccgcgcccgcttccagcagatg
gcgttcctcaacaagggcctgcgcatcacgctcgccgacgagcgccccgtgcccgaggac
gccccggaggggacggtcgccaagagcgacgacttcttctacgagaagggcctcgaagac
tacgtcgagtacctcaacaagaccaagaaggtcgaggtcgtccacgaagacatcatcagc
ttcgaggccgaagacaccgagcgccgcatggccctcgaggtcgccatgcagtggaacacc
tcctacagcgagagcgtccacacctacgcgaacacgatcaacacccacgagggcggcacc
cacgaagagggcttccgcgctgcgctgaccacggtcgtcaacaagtacggccgcgacaag
gctctcatcaaggagaaagacgacaatctctccggcgaagacgtccgcgagggcctgact
gcggtcatctcgatcaagctgggcgagccgcagttcgagggccagaccaagaccaagctc
ggcaacaccgacgccaagtcgttcacgcagaagatcgccttcgaccagctcaacgactgg
ttcgaccgcaacccgaagcaggcgcaggcggtcatccgaaagggcctctcggctcaggcc
gctcgcctcgctgcgcgcaaggctcgcgaccagaccaggcgcaagggcgtcctcgagtcg
aacggcatgcccggcaagctcaaagactgccagagcaaagaccccgcgctcagcgagatc
ttcctggtcgagggcgactcggccggcggttccgcggtccaggggcgcaaccccgagacg
caggcgatcctgccccttcgcggcaagatcctgaacgtcgagaaggcccgcctcgaccgc
gctctcggcaacaacgaggtgcaggccatgatcaaggcgttcggcgccgacatcggcgac
gacttcgatcccgacaaggccaggtaccacaagatcgtgctgatggccgatgccgacgtc
gacggccagcacatcaccacgctgctgctgacgctcctgttccgctacatgcgaccgctc
atcgacctcggctacgtctatctggccatgccgccgctgttcaagctcaagtggtcgaac
gccccgcacgagtacgtctacagcgacctcgagcgcgacgccctcacgctcgccggccgc
gccgagggcaagcgcatgccgaaagacaacggcatccagcgctacaagggtctcggcgag
atggactacaaagagctctgggagaccacgatggatcccgagacgcgcactctccgtcag
gtcaccctcgacgacgcggtagcggccgacgcaatcttcaacacgctcatgggcgaagac
gtcgaactgcgacgcaacttcatccaacagaacgcgaaagacgttcgcttcctcgacatc
tga
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